Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0859 ATGGCACTGAATAAAGCAAGAAACCTGTTAGGTACCAATACCGGGAAGGATCATAGCTTGTTGCCTCCCTTTTCAAATGCAACAGGTCAGTGTGTACATAACGATATCTCTGTTTGGGAAGAGGAAGAATTTTATGTGCCATTTGGTAACAACGGAATTGCTTCTAGAAGAGTTCCTGCTTCACCTGAGAGATACCGGAAGCATGAAGATAGGTTTGGGTTGAATAGGGAGAATGGCCATGTTAAGTATGAAGGTCTTACTAAAATTTTGGGGTTGAGGAGAATGGAATCTGAGAGTTCCGAGATAAGCGACTTTATTTCTTCTATGAAAGAGCCAACCCAGGAGATGGAGAATGGGGCTTTTGTAAATAGTATAAGCAAAAGCAATAAGGAAGCTGGTGATTCCCATACCTCAAGGAAGGTCATTGGTGAGTTAATTAGTGACATATCTGGCCATCGGCCAATTGTGTCCCCTTGTGCGCAATATGAGTATGAATCTACTTATTCGGATGATCATTCTGGTTCAGGAGTTTTCGATGATTATCGTCCTGAGAAAATGAAGTTTCTATGCAGCTTTGGTGGGAAAGTATTACCAAGGCCCAGTGATGGGAAACTCAGATATGTAGGGGGACAGACTCATATGATATCTATCCGAAAGGATATCTCATGGGAAGCGCTTGTGAAGAAGACCTCGGGTATTTGCAACCAGCCCCACACAATCAAATATCAACTTCCAGGGGAGGATCTTGATGCTCTAATATCTGTCTCCTCTGATGAAGATCTTCAAAATATGATAGAGGAATACTATGGGCTTGAAAGGCATGAAGGTTCTCAGAGACACAGAATATTTTTAGTTCCTTTGGGTGAATCTGAAGAGACTTCTTCATTTGAGGCTAGCAACATTCAGCAGAGTGATCCCGGTTACCAATATGTTGTTGCCGTGAATGGCATAACAGACCCTATTCATGGAAAAAGCATTGGAGGGCATTGTTCGACAAATGAGGCGAGTCAGTTGGATACAAGTTTGAATCTCGCCCCTTCTCCCATATCCCCTTATCCTTTGGACGCTAAAGGTGGTGGTAATGCTTTAAATCCAAATGGAACTTTTAATGATTCCCTGAATCTTCACAGACCCCACATTCAATCTCCACTGATATCCCCGATTCGAATTGAGGGAAGAGGTTCAAGCATCGGTTATACACAGTTGCTTGCTAATAATTCGTGCCAAGGAAGTACCGAGAGCAACACATCCTTTGTTACAGCTCAGCTACAACCTGAGAACTCCAGTATAAGCACTGCTGATAGAAGATACTCTCAACAAGTACCTGTGACTTTGTTAAGTAACAGTCTTCTTAATCAACACAACGATGTTCGTAAGCTGGAGAAGCACTATGAACAGCATATTGGCAACTACAATCCTGACAAGGAAACTGTGACTCCTTTATATGTTAATCCAAGTGACGGTTACAGTGATAAATTTTTTAGTAAAAGGCCCTTGCATAAGGAAAGAATACCCCTCTCTGGAAATCCTCCTTCACGTGTGGATGACCCAATCCGCCAACATGCCGAATCTGATGGTACTACGTTCTCCCCTTTTGGAATGCCTCATGCCTTTTCTGATTCGCAGTTGCATGAGTGTGAAACAAGATCTGGATACTGCTCACAAGAAGGAACTGGCCTATCTTTCTCCTTGGACCAGGCAAAGGCTCCATCATCTTCAATGTTACACTCTAGTGTCTCACAGAGGAACATTCTGGAGATACATAATGATTCCATTCTCCTTTATCCTCAAATACAAAGTAAGATAACAAATAATATTCATTCATCTGAACTGCACAGAAGGCATGATGTTGCATCCTCGTTTCCATATTCAGAATCACCGGGAATGAATGGTCTTGTTCATAGTGATAGCATTTTAATTGAAAAAAAGTACCCGGTTGCTCAAACTAATCTAAGTGGGTCTAGCTTTGTAGTGAAGCATGCTGAGGAGAATTCTTTGACTTCAGAAATGATTAAGAGAATTGAAGAAAAGAATCCTACTGAGACAAAGGAGAGCAAGATTTACGAGGGCGAAGCATCCTCCGATCATAGGGTTCATGTCACTGAGTTGAATCTTTTGGACTCCTTCCCTTCTAATAATTTGAATGCCAAGGTTAATATGCAAAAGGATAGGGAGCTACATCCAAAGGATAGGGTTGCTGTATCATTAGGCACGATGGGAGTCTGCATGAATAATCATGCCGACAAAATCCCTTATCATCTTCTTGACACCAGCCAAAAGACTAGTGATGGTAAGAAATGTGCTGTGGCCGAAGGTTTGAATGGTGAGCAAGGTACTGATTTTTCATTGACAAGAAACTCTGACTTAAATAGTTCGACTTTCAAATGTGGAGAAACTTCTAGTGACAAAACTTCTCTTGGTGATATGTTTGAACTGTCCATTAACTTAGATCCTTGTAAAGCACCACATGTTCACCCTTCTGTAAATCTGAAGGGTGCAGGTCTTCATGAAAATCCGACTTTAAGCTCTGCATCATTGTATCCTGCTGTACTTAAGGATGGTCCTGGTCCAAGTTCAATCTTGTCTATGAACCACCAGCCCATTCCAAAGATGAATATTGATCATGACTTGATAACCAGTTCAGACCAGATGGTTGATCGGGTTACCAGTGGCCATTTTGCTGAAAAGTCAAAAGCTGGCGATGTCATGTCTGAACAATCAAGAAGATCAGAGAAGCACAATGATGTAAACCAAGTGGAGCCATTTTCTGCAATAGAAGACATGATTAGTATTGCTCCTCCAGACATTGATTCTTCATTGACAATCACCCCAAAAATCGTGGATGAAAATGGAAGTCGTGTTGTATCCTTGTCTCCTACAGAGGAAGAGAGCATCATCCGAGAGTCTGAACCTGAGGATTTTAAAGATGATGAATCAGACAGGAATGAATTCCTCACTGATGCAATGATAGCAGAAATGGAAGCAAGCATCTACGGTTTGCAGATAATAAGGAACGATGATCTTGAAGAACTTCAGGAGTTAGGATCTGGTACTTATGGAACGGTTTATCATGGAAAATGGCGTGGATCAGATATTGCTATAAAGAGAATTAAAAAGAGCTGCTTTGCAGGGAGATATTCTGAGCAAGAAAGATTGACAAAAGACTTTTGGAGAGAGGCACAAATCCTTTCAAATCTTCACCATCCTAACGTGGTTGCATTTTATGGGATAGTACCGGATGGATCTGGAGGAACCTTGGCAACTGTGACTGAGTATATGGTTAATGGTTCCCTTAGGCATGTCCTCATCACGAAAGATAGATTACTAGATCATCGTAAAAAGCTAGCAATTGCCATGGATGCAGCTTTTGGTATGGAATATTTGCATTCAAAAAATATTGTCCATTTTGATTTGAAGTGTGACAATTTGCTAGTCAATCTAAGGGATCCACAACGGCCCGTATGCAAGGTTGGAGATTTTGGATTATCAAGAATTAAACGCAATACCCTGGTATCCGGTGGTGTGCGCGGAACCCTTCCATGGATGGCACCAGAGCTGTTGAATGGTAGCAGCAGCAGGGTTTCGGAAAAGGTTGATGTTTTCTCATTTGGCATCTCAATGTGGGAGATATTGACTGGGGAGGAACCTTACGCGGATATGCATTGTGGCGCCATTATCGGGGGGATAGTAAAGAACACTCTTCGACCACCTATTCCGGAACATTGCGATGCCGAATGGAGGAAGCTCATGGAAGAATGTTGGTCACGTAATCCAGAAAGCCGACCGTCATTCACAGAGATAACACGCAGGTTGCGATCTATGTTTATGACCCTTCAAGCAAAGGGATTGTCAGGCATGTCAGTTAAGGTCTAG 3873 0.4198 MALNKARNLLGTNTGKDHSLLPPFSNATGQCVHNDISVWEEEEFYVPFGNNGIASRRVPASPERYRKHEDRFGLNRENGHVKYEGLTKILGLRRMESESSEISDFISSMKEPTQEMENGAFVNSISKSNKEAGDSHTSRKVIGELISDISGHRPIVSPCAQYEYESTYSDDHSGSGVFDDYRPEKMKFLCSFGGKVLPRPSDGKLRYVGGQTHMISIRKDISWEALVKKTSGICNQPHTIKYQLPGEDLDALISVSSDEDLQNMIEEYYGLERHEGSQRHRIFLVPLGESEETSSFEASNIQQSDPGYQYVVAVNGITDPIHGKSIGGHCSTNEASQLDTSLNLAPSPISPYPLDAKGGGNALNPNGTFNDSLNLHRPHIQSPLISPIRIEGRGSSIGYTQLLANNSCQGSTESNTSFVTAQLQPENSSISTADRRYSQQVPVTLLSNSLLNQHNDVRKLEKHYEQHIGNYNPDKETVTPLYVNPSDGYSDKFFSKRPLHKERIPLSGNPPSRVDDPIRQHAESDGTTFSPFGMPHAFSDSQLHECETRSGYCSQEGTGLSFSLDQAKAPSSSMLHSSVSQRNILEIHNDSILLYPQIQSKITNNIHSSELHRRHDVASSFPYSESPGMNGLVHSDSILIEKKYPVAQTNLSGSSFVVKHAEENSLTSEMIKRIEEKNPTETKESKIYEGEASSDHRVHVTELNLLDSFPSNNLNAKVNMQKDRELHPKDRVAVSLGTMGVCMNNHADKIPYHLLDTSQKTSDGKKCAVAEGLNGEQGTDFSLTRNSDLNSSTFKCGETSSDKTSLGDMFELSINLDPCKAPHVHPSVNLKGAGLHENPTLSSASLYPAVLKDGPGPSSILSMNHQPIPKMNIDHDLITSSDQMVDRVTSGHFAEKSKAGDVMSEQSRRSEKHNDVNQVEPFSAIEDMISIAPPDIDSSLTITPKIVDENGSRVVSLSPTEEESIIRESEPEDFKDDESDRNEFLTDAMIAEMEASIYGLQIIRNDDLEELQELGSGTYGTVYHGKWRGSDIAIKRIKKSCFAGRYSEQERLTKDFWREAQILSNLHHPNVVAFYGIVPDGSGGTLATVTEYMVNGSLRHVLITKDRLLDHRKKLAIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLRDPQRPVCKVGDFGLSRIKRNTLVSGGVRGTLPWMAPELLNGSSSRVSEKVDVFSFGISMWEILTGEEPYADMHCGAIIGGIVKNTLRPPIPEHCDAEWRKLMEECWSRNPESRPSFTEITRRLRSMFMTLQAKGLSGMSVKV* 1291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0859 1290 Gene3D Phosphorylase Kinase; domain 1 1001 1095 - -
Lan1g0859 1290 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1133 1145 IPR008271 GO:0004672|GO:0006468
Lan1g0859 1290 MobiDBLite consensus disorder prediction 893 915 - -
Lan1g0859 1290 Gene3D - 204 286 - -
Lan1g0859 1290 SMART serkin_6 1008 1275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan1g0859 1290 SUPERFAMILY Protein kinase-like (PK-like) 995 1270 IPR011009 -
Lan1g0859 1290 ProSiteProfiles Protein kinase domain profile. 1008 1276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan1g0859 1290 MobiDBLite consensus disorder prediction 963 980 - -
Lan1g0859 1290 PRINTS Tyrosine kinase catalytic domain signature 1090 1103 IPR001245 GO:0004672|GO:0006468
Lan1g0859 1290 PRINTS Tyrosine kinase catalytic domain signature 1127 1145 IPR001245 GO:0004672|GO:0006468
Lan1g0859 1290 PRINTS Tyrosine kinase catalytic domain signature 1198 1220 IPR001245 GO:0004672|GO:0006468
Lan1g0859 1290 PRINTS Tyrosine kinase catalytic domain signature 1242 1264 IPR001245 GO:0004672|GO:0006468
Lan1g0859 1290 Gene3D Transferase(Phosphotransferase) domain 1 1096 1284 - -
Lan1g0859 1290 PANTHER KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN 89 1282 - -
Lan1g0859 1290 CDD STKc_MAP3K-like 1014 1271 - -
Lan1g0859 1290 ProSitePatterns Protein kinases ATP-binding region signature. 1014 1039 IPR017441 GO:0005524
Lan1g0859 1290 SUPERFAMILY CAD & PB1 domains 201 288 - -
Lan1g0859 1290 CDD PB1_UP2 189 284 - -
Lan1g0859 1290 SMART PB1_new 200 287 IPR000270 GO:0005515
Lan1g0859 1290 MobiDBLite consensus disorder prediction 957 980 - -
Lan1g0859 1290 Pfam PB1 domain 202 286 IPR000270 GO:0005515
Lan1g0859 1290 Pfam Protein tyrosine and serine/threonine kinase 1010 1271 IPR001245 GO:0004672|GO:0006468
Lan1g0859 1290 PANTHER SERINE-THREONINE PROTEIN KINASE 89 1282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0859 Lan-Chr1 19435102 19443113 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g0859 185 317 MAP Kinase Kinase Kinase AT1G16270 57.895 1.72e-38 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Lan1g0859 PK_Tyr_Ser-Thr 1e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0859 - - gmx:100790135 1481.46