Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0846 ATGGCTGAGACGACAGGGCGGAGCAGGGTGGTCGGAGATTACATAGTTGGGAGGAAAATCGGAGCTGGTTCGTTTTCGGTGGTGTGGCACGGAAGACACAAGGTTCATGGAACCGAAGTAGCGATAAAGGAAATTGGTACTCTTCGTCTTAACAACAAGTTACAAGAGAGTCTCATGTCTGAGGTTTCTATACTCAACCAGATTAATCATCCTAACATCATTCGTTTGCATGAAATCATCCAGGCTCCCGGTAAGATACATATTGTGCTAGAATATTGTAAAGGGGGAGATCTTTCTTTGTACATACAGCGCCATGGAAGGGTACCGGAGGCTACTGCAAAGCATTTTATGCAGCAACTTGCTACGGGTCTACAAGTTCTTCGGGACAATAACCTTATTCACCGAGATCTGAAACCACAGAACCTTCTTCTCTCCAGAAATGATGAGAGTTCAGTGTTGAAGATTGCTGACTTTGGATTTGCGAGATCTCTGCAACCTAGAGGCCTTGCAGAAACGTTGTGTGGTTCACCGCTCTACATGGCTCCAGAAATTATGCAACTACAGAAGTATGATGCTAAGGCAGATCTCTGGAGTGTTGGTGCTATTTTATTTCAGCTTGTTACCGGAAAGACACCTTTTACCGGAAACAATCAAATACAGTTACTACAGAACATTATGAAATCAACAGAATTGCAGTTTCCTCCTGATATCCAAAGTCTGAGCATTGACTGCAAAGATTTGTGTCAAAAATTGCTACGCCGTAATCCAGTGGAACGCTTAACTTTTGAAGAATTCTTTAACCACCCATTCCTTTCTCAGAAGCAACCAGAACTAGATGAATCATTGAGGAACAGAAGTTCCTCACGGCTGGTAGGCGAGTGTTGTTCAACAGAGTCTGACCCTTTGAGAAGGACCGAGGAAAATTATCAAGAGGACTGCTTTCCTTTCTCTCTAGATGTTGATTCTAGTGGTGCTGAGGGGATCCCTTCCTTTTCAAGGAAGAAGTCCTCGATGAAGTCTACCTATGGATTTGATCTAAATACAATACGAGATAAAGTAGAGCCAACATCAACAAGAAGATTGGACAACCATAACAAGAAGATTGATAGTGTTGCACAGAGACCTGAAAACACAACAAGAAGATTGGACAACCATAACAAGAAGATTGATAGTGTTGCACAGAGACCTGAAAACACAACAAGAAGATTGGACAACCATAACAAGAAGATTGATAGTGTTGCACGGAGACCTGAAAACACTACAAGAAGATTGGACAACCATAAAATATCAAGAAATCTCACTGATCCTCCAGAATCTCCAGAACAGAGATTTGCGATCCCTCATTCAAAAGTCACTGATTCACTAGAGAATATTGATCAAGATTATGTTCTCGTGTCTGGGCCACCTATGGATGTTTCATCATCATCAGTGAGTAATTCAAAGATGAGTAGTTCCCAATATAGGCCAGGCAATTTACCCCAAGATCCTTCTAATGCAATCACTAAGTTAAGTGCTCCTATGCCAATTGTTGTGGCACCTACCAGTAGCACATACCAAATTGGAAGTGCAGAAAGTCGGGACTCTGCTCCTGGGACTTCACATGGATCGATAGATACAGGTGATGAACAGCCATCAGCTCACTGCATGACACGGATAAAATCGTTGAAACAGTGTGCATATGCCCTCACGGAATTAGTTAATGAAAAGATAGAGGCAGGAAAGCAGCTTGAAGCATTCTCTATTCAGCTTGTAATTCTTGCCATTTGGAAGCAAGCACTGCACATGTGCCATACTCAGGCTGCTTCAGCCATGGAAGGAAGTCCAAGTCAAGAAACTTCAAGGTATAGGAGAAGCACCAGCAAGAAGCATGGCAGTTTCGATTTGGAAGGATGCCTTCTTGGAAACACCCAAGGGTCAAAAGATATATTACCGCAAATTGAAAGTGAATTTCTGAAGGAAATCGAACATGGTGAAGAGCTTTCCAAGGGCATTCAGCCTGGAAATACAGAGATGCCAGATGCAATGGAGACGATATTTCAATCTGCGCTTGCTTTTGGGAAACACGGGGGTGTAGAAGAGCTCATGGGTGAAATGGATAGTGCTGATGCATTGTATTCGAAAGCCGTCCGTCTATTAGTCTTCCTTCTATCGGAAGCACCATCCCTGATTCTCAATCCTCCATTTTCGCTGACAAACTCAGACCGTTACAGACTTCGGACTTACGTCGATATGCTTAATACCAGGCAAGGTTATGCAAGGTCTCAGCGAATGGAACTTCGGAAATGTGATGATAGTCAAGGCATCCATAAGGAGAAGTTGTAG 2322 0.4302 MAETTGRSRVVGDYIVGRKIGAGSFSVVWHGRHKVHGTEVAIKEIGTLRLNNKLQESLMSEVSILNQINHPNIIRLHEIIQAPGKIHIVLEYCKGGDLSLYIQRHGRVPEATAKHFMQQLATGLQVLRDNNLIHRDLKPQNLLLSRNDESSVLKIADFGFARSLQPRGLAETLCGSPLYMAPEIMQLQKYDAKADLWSVGAILFQLVTGKTPFTGNNQIQLLQNIMKSTELQFPPDIQSLSIDCKDLCQKLLRRNPVERLTFEEFFNHPFLSQKQPELDESLRNRSSSRLVGECCSTESDPLRRTEENYQEDCFPFSLDVDSSGAEGIPSFSRKKSSMKSTYGFDLNTIRDKVEPTSTRRLDNHNKKIDSVAQRPENTTRRLDNHNKKIDSVAQRPENTTRRLDNHNKKIDSVARRPENTTRRLDNHKISRNLTDPPESPEQRFAIPHSKVTDSLENIDQDYVLVSGPPMDVSSSSVSNSKMSSSQYRPGNLPQDPSNAITKLSAPMPIVVAPTSSTYQIGSAESRDSAPGTSHGSIDTGDEQPSAHCMTRIKSLKQCAYALTELVNEKIEAGKQLEAFSIQLVILAIWKQALHMCHTQAASAMEGSPSQETSRYRRSTSKKHGSFDLEGCLLGNTQGSKDILPQIESEFLKEIEHGEELSKGIQPGNTEMPDAMETIFQSALAFGKHGGVEELMGEMDSADALYSKAVRLLVFLLSEAPSLILNPPFSLTNSDRYRLRTYVDMLNTRQGYARSQRMELRKCDDSQGIHKEKL* 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0846 773 Pfam Protein kinase domain 15 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan1g0846 773 CDD STKc_ATG1_ULK_like 20 270 - -
Lan1g0846 773 ProSitePatterns Serine/Threonine protein kinases active-site signature. 132 144 IPR008271 GO:0004672|GO:0006468
Lan1g0846 773 MobiDBLite consensus disorder prediction 518 540 - -
Lan1g0846 773 SMART serkin_6 14 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan1g0846 773 MobiDBLite consensus disorder prediction 603 622 - -
Lan1g0846 773 SUPERFAMILY Protein kinase-like (PK-like) 10 497 IPR011009 -
Lan1g0846 773 ProSiteProfiles Protein kinase domain profile. 14 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan1g0846 773 MobiDBLite consensus disorder prediction 355 443 - -
Lan1g0846 773 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 452 747 IPR045269 GO:0004674|GO:0006914
Lan1g0846 773 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 6 306 IPR045269 GO:0004674|GO:0006914
Lan1g0846 773 PANTHER SERINE/THREONINE-PROTEIN KINASE ATG1B 452 747 - -
Lan1g0846 773 PANTHER SERINE/THREONINE-PROTEIN KINASE ATG1B 6 306 - -
Lan1g0846 773 Gene3D Transferase(Phosphotransferase) domain 1 5 315 - -
Lan1g0846 773 MobiDBLite consensus disorder prediction 518 544 - -
Lan1g0846 773 MobiDBLite consensus disorder prediction 469 493 - -
Lan1g0846 773 MobiDBLite consensus disorder prediction 355 434 - -
Lan1g0846 773 ProSitePatterns Protein kinases ATP-binding region signature. 20 43 IPR017441 GO:0005524
Lan1g0846 773 SUPERFAMILY Tropomyosin 360 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0846 Lan-Chr1 19264275 19271110 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g0846 10 271 CBL-interacting serine-threonine protein kinases AT2G30360 37.687 9.45e-55 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-3 Lan1g0846 Pkinase 1.3e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0846 K08269 - gmx:100791596 1150.19