Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0840 ATGGGGTCTAGTTGTTCTAAATTCTCTTTCTGTTGGTTCCACTCTCACCTCAAACCCTCTGTTCTTGAATCCTCAGACCAAGAAAATGGTGGGAAGAGTGAAATAAACATGTGGGGTACTATTAGTGAGTTCAGTTTGGAGCAATTGAAGGGTGCAACAAATGGGTTTTCTTCAGAAAACATAGTCTCTGAGCATGGTGAAAAAGCTCCTAATGTTGTTTATAAAGGGAAGATTGAAGATGGAAAGTGGATAGCTATCAAACGCTTCAACAAGTTTGCTTGGCCTGATTCTCGCCAATTCCTTGAGGAAGCTAGACAAGTGGGGAGACTTAGAAGTGAACGTTTGGCCAATTTGATTGGTTATTGCTATGAAGGAGAAGAGAGGCTTCTAGTAGCAGAGTTTATGCCCTATGAAACTCTTGCTAAACATCTATTTCATTGGGAGGCACAGCCCATGAAATGGGCAATGAGGTTGAGGGTGGCATTCTACTTAGCTCAAGCTCTAGAGTATTGCACCAGTAAAGGAAGGGGTTTGTATCATGATCTCAATGCCTATAGGGTCTTGTTTGATCAGGACGGTAATCCCAGGTTGTCTTGCTTCGGGCTCATGAAAAACAGCAGAGATGGCAAGAGTTACAGTACAAACTTGGCTTTTACCCCTCCGGAGTACTTAAGAACTGGTAGAGTTACACAAGAGAGTGTGGTTTATAGTTTTGGAACCCTGTTGTTAGATCTCTTGAGTGGTAAACATATTCCCCCAAGCCATGCACTTGACCTGATTCGCGGCAAAAACTTTTTGATGTTGATGGATTCTGCCTTAGAGGGTCATTTCTCAAAGGATGATGGAACTGAGTTGGTTCGGTTGGCTTCCCGTTGTTTACAGTATGAAGCTCGTGAGAGGCCAAACGCAAAGTCTCTTGTTGCTTCTCTCATGTCACTTCAAAAAGAAACAGAGGTCCCCTCATTTATTCTGCTCGGTCTTCGGCATGAAACTGCACCCTCAGCTGAGCCCTTGTCATTGACACCTTTTGGTGAAGCTTGTTTGAGACTTGATCTTACCGCAATATACGGAATATTAGAGAAAATCGGTTACAAGGATGATGAAGGAATTGCCAATGAGCTTTCATTCCAATTGTGGACTAGTCAAATGCAGGAGACCTTGAATTTGAAGAAGCATGGAGATACTGCATTTAGAGCTAAGGATTTTGTCACTGCCACTGAATGCTACACTCAATTCATAGATGGAGGGACAATGGTATCGCCTACGGTATATGCGAGGCGCTGTTTATCGTATCTGATGAATGAAATGCCAAAAGAAGCTCTAAGGGACGCGATGCAAGCTCAAGTGGTATCTCCTGAATGGCCTACTTCTTTATATCTTCAAGCAGCTTGTCTTTTCAGCCTAGGAATGGAAAATGATGCACAAGAAACTCTCTATGATGGGATTAACATGGAAGCCAAAAAAAACAGAAAATGA 1476 0.4268 MGSSCSKFSFCWFHSHLKPSVLESSDQENGGKSEINMWGTISEFSLEQLKGATNGFSSENIVSEHGEKAPNVVYKGKIEDGKWIAIKRFNKFAWPDSRQFLEEARQVGRLRSERLANLIGYCYEGEERLLVAEFMPYETLAKHLFHWEAQPMKWAMRLRVAFYLAQALEYCTSKGRGLYHDLNAYRVLFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTQESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSALEGHFSKDDGTELVRLASRCLQYEARERPNAKSLVASLMSLQKETEVPSFILLGLRHETAPSAEPLSLTPFGEACLRLDLTAIYGILEKIGYKDDEGIANELSFQLWTSQMQETLNLKKHGDTAFRAKDFVTATECYTQFIDGGTMVSPTVYARRCLSYLMNEMPKEALRDAMQAQVVSPEWPTSLYLQAACLFSLGMENDAQETLYDGINMEAKKNRK* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0840 491 Gene3D Phosphorylase Kinase; domain 1 31 134 - -
Lan1g0840 491 Gene3D Tetratricopeptide repeat domain 383 491 IPR011990 GO:0005515
Lan1g0840 491 Gene3D Transferase(Phosphotransferase) domain 1 136 327 - -
Lan1g0840 491 SUPERFAMILY TPR-like 387 482 IPR011990 GO:0005515
Lan1g0840 491 SUPERFAMILY Protein kinase-like (PK-like) 34 319 IPR011009 -
Lan1g0840 491 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 1 490 IPR045845 GO:0004672|GO:0009742
Lan1g0840 491 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 1 490 - -
Lan1g0840 491 ProSiteProfiles Protein kinase domain profile. 59 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan1g0840 491 Pfam Protein tyrosine and serine/threonine kinase 73 310 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0840 Lan-Chr1 19183715 19188886 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g0840 19 310 Glycoside Hydrolase AT3G07070 32.500 1.39e-41 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Lan1g0840 PK_Tyr_Ser-Thr 1.8e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0840 - - gmx:100814477 909.057