Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0831 ATGCACTTACATACATATCCTATTTTATACCTCACTTTCATATTCTCTCTCATCTTTCTCTCTCCAGAAGACCCAAACCCTAAAGTGCCTTATCCACCACCAAGACGATGCTGTTGTAGAGACTCTGAAACCGCAATATTACGGCCACAATTACAGTTGTCGGTGCAATCTAAAATACCTTTTTATCAATTTCTCATGGATGATGATGTGCTGAACATGTCCAATTGGGGTTATTATGAACCCTTCAAAGGAGGGCACCTTGGTCTGCATCTCATGCCAGGCATGATAGATCGTGACACAAAACCAGTTTTTCCTGGACGTGATCCATCTATGTTTGTAGGTGCAAATGACCGGGACTCAAAACCGTTTTTATCTGATCATGATCCATCTATGTTTATTGGTGCAAATGATCGTGATTCAAAACCTTTTTTGTCTGGTCGTGATCCTTCTATGTTTGTTGGTGTAAATGATCGTGACATGAAGCCATTTTTGCCTGGTCGTGATCCATCTATGTTTATTGGTGCGAATGGAACCATGCACCCACGAGATTGTGTTGTTTCGGATGCGCCAATGTCGATGAACTATGTAAGCGATGGTTGGATAAGCCTGAGGGACAGGTTTTTTAATATGCCCCCTGTCACTCCTGATAATGCTGTTCTTCCAGAATCATCAGTACCCTCAACCTTGCAAACTACACAGCTACCTGACATTTCAAGAAATGAGAAGGTGGATAGCGTTGAAGACTCAGTTGTTAAAAAAGTTGGCCAACCAAAGAAAAGGCAAAGTCGGGGTGTTATAGCTTCTCCGAAGGCTAAGAAACCGAGGAAGCCAAAGGTTAACAGCAATGCTTCAGTTCAACGTGTGAAGCCCGTTAAGAAGACTAAAGAGCTTGTCATAAATGGAATTGATATGGACATTTCTGGCCTACCAATTCCAGTTTGTTCATGCACTGGTACTCCTCAGCAGTGTTATCGCTGGGGCTGTGGAGGTTGGCAATCAGCTTGTTGTACCACAAATGTGTCGATATATCCTTTGCCAATGAACGTAAAAAGGCGTGGTGCAAGGATAGCAGGGCGGAAAATGAGCCTAGGTGCTTTTAAAAAGGTTTTAGAGAAACTTGCAGCCGAAGGTTATAATTTTGTAAACCCAATCGATCTGAGGACTCATTGGGCCAGACATGGAACCAACAAGTTTGTAACTATCAGGTAG 1209 0.4276 MHLHTYPILYLTFIFSLIFLSPEDPNPKVPYPPPRRCCCRDSETAILRPQLQLSVQSKIPFYQFLMDDDVLNMSNWGYYEPFKGGHLGLHLMPGMIDRDTKPVFPGRDPSMFVGANDRDSKPFLSDHDPSMFIGANDRDSKPFLSGRDPSMFVGVNDRDMKPFLPGRDPSMFIGANGTMHPRDCVVSDAPMSMNYVSDGWISLRDRFFNMPPVTPDNAVLPESSVPSTLQTTQLPDISRNEKVDSVEDSVVKKVGQPKKRQSRGVIASPKAKKPRKPKVNSNASVQRVKPVKKTKELVINGIDMDISGLPIPVCSCTGTPQQCYRWGCGGWQSACCTTNVSIYPLPMNVKRRGARIAGRKMSLGAFKKVLEKLAAEGYNFVNPIDLRTHWARHGTNKFVTIR* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0831 402 Pfam GAGA binding protein-like family 154 402 IPR010409 -
Lan1g0831 402 PANTHER BNAA06G09500D PROTEIN 50 116 - -
Lan1g0831 402 PANTHER BNAA06G09500D PROTEIN 157 402 - -
Lan1g0831 402 PANTHER - 157 402 IPR010409 -
Lan1g0831 402 PANTHER - 50 116 IPR010409 -
Lan1g0831 402 MobiDBLite consensus disorder prediction 253 286 - -
Lan1g0831 402 SMART GAGA_bind_2 66 402 IPR010409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0831 Lan-Chr1 19082874 19085097 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g0831 157 402 BBR or BPC Transcription factor family AT2G01930 57.634 2.18e-90 272
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Lan1g0831 GAGA_bind 2.6e-91 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0831 - - lang:109351244 781.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0387 12 9158207 9160277 Lan1g0831 1 19082874 19085097 LSH