Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0830 ATGGAGAAGAACCCATTTCACCTTTTTCCTCATCTAACTTCAACACTCATCCTTGTGATGATAACTATTATGTTTCCTATAGCAGAAAAAGTTGCAGCAGTTTCATCCATCAAAACTGATGCAGAGTCTCTTCTCATGTTCAAAAAGGTTTTGAAAGATCCAAACAAAATTCTATCAGGGTGGCAGATAAACAAGAATCCATGCAGCTGGTATGGAGTTTCATGCACCCAAGGAAGAGTTACTCAACTTGATATCAATGGCAATAGTAACTTAATTGGAACCACTATTTCTCTTGACCCTTTATCTTCTCTAGATATGTTGTATGTTCTAAGATTGTCTTTGAATGGCTTTTCTGTAAATTCTACTTCTTTGCTTCAGTTACCATATAGTTTGACTCAGCTTGATTTATCCTTTGGTGGAGTTTCAGGTCCTGTCCCTGAAAACTTTTTCTATAAGTGTCCAAAACTTGTTGTTGTGAACCTTTCTTATAATAACTTGACAGGTATTATACCTGAAAAGTTGTTAACAAGTTGTGATAAACTTCAAGTACTTGACATGTCTTCAAACAATTTGACAGGCTCAATTTCTGCACTCAAAATTGAGTGTAATTCCTTGTTGCAACTTGATCTATCCGGAAACCGATTATCAGACTCAATTCCGATCTCTTTGTTAAACTGCACTAGCCTTAAGACTTTGAACTTAGCTAATAATTTGATTTCTGGTGAAATTCCAAAGGGTTTTGGTCAGTTAAATAAGCTAGAGACTTTGGATCTTTCTCATAATCAAATTACTGGTTGGATCCCTTCTGAGTTAGGAAATGCATGTGCTTCCCTTTTGGAAGTTAAGCTTTTCTTTAACAATATATCAGGTTCAATCCCTTCTGGTTTCAGTTCTTGCAATTTGATGCAACTTCTTGACATATCTAACAACAACATGTCAGGTCAGTTACCAGCTTCTATCTTTCAGAACCTTGGATCATTACAGGAACTGAGGTTGGGATATAACGCATTCTTCGGTCCTTTTCCATCTTCAATATCTTCCTGCAAGAAATTGAGGATTGTGGATTTAAGCTCAAACAAGATTTCCGGGTCTATCCCTAGAGATATATGCCCAGGGGCAGCATCACTTGAGGAGCTGAGAATGCCAGATAATCTCATCACCGGAGGAATCCCTGCTGAGTTGTCGAAGTGCTCACAATTGAAGACACTTGATTTTAGTCTCAACTACCTCAATGGTTCGATCCCTGATGAGCTTGGAGAACTTGAGAATCTTGAGCAGCTGATAGCTTGGTTCAATGGCTTGGAAGGAAAAGTCCCACCAAAGTTGGGGCAATGCAGGAACCTTAAGGATCTTATACTGAACAATAACCAACTCGACGGAAGAATTCCGATTGAGTTGTTCAACTGCAGCAATCTTGAGTGGATATCACTTACAAGCAATGGACTCACCGGGGAGGTACCGAGGGAGTTTGGCCTATTGACAAGGCTAGCAGTTCTGCAGCTTGGAAACAACAACTTTACAGGTGAGATTCCAGGAGAGTTGGGAAATTGCAGCAGTTTGGTGTGGTTGGATTTGAATAGTAACAAGTTAACAGGTGAGATCCCACCCAGACTTGGAAGGCAGCAAGGAGCAAAATCATTGTTCGGTATCCTATCAGGAAACACTTTGGTGTTTTTAAGAAATGTCGGAAACTCATGCAAAGGAGTTGGAGGATTATTGGAATTCTCTGGAATTAGACCTGAAAGGCTATTGCAGGTTCCAACATTGAGGACTTGTGATTTAGCACGACTATATTCTGGTCCTGTTCTAAGCTTGTTTACCAAGTACCAGACTTTGGAGTATCTCGATCTCTCATACAACGAGCTTAGAGGGAAAATCCCTGATGAATTTGGAGACATGGTGGCCTTACAGGTTCTCGAGTTATCTCACAACCAGTTATCCGGTGAAATCCCTTCATCACTTGGACAGCTCAAGAATATGGGTGTGTTTGATGCATCACATAATAGGCTGCAGGGTGAAATACCAGACTCATTCTCTAAACTCTCATTCTTGGTGCAAATTGATCTATCAAGCAATGACTTGACAGGGCAAATTCCACAAAGGGGACAACTAAGTACACTTCCGGCTACACAGTATGCAAACAACCCTGGCCTCTGTGGTGTTCCATTGCCCGAATGTCAAAATGACAACAGCCAAGCCACACCAAATCCAAGTGATGATGCTGGAAAGGGAAGGCAAAGAAGTGCAGCCTCATCATGGGCTAATAGCATTGTCATGGGAGTTCTCATTTTTGTTGCTTCTCTATGTCTCTTAATTGTGTGGGCTATCGCAATCCGTGTAAGAAGGAGGGAGGCTGATGAAGTCAAGATGCTCAATAGTTTGCAAGCATCACATGCCGCAACAACATGGAAGATCGACAAAGAGAAAGAGCCCCTGAGTATTAATGTTGCAACATTCCAGAGGCAGTTGCGGAAGCTCAAGTTCTCTCAATTGATTGAAGCAACCAATGGTTTCTCTGCAGCAAGCCTTATTGGTTGTGGTGGCTTTGGTGAAGTGTTCAAGGCCACACTCAAGGATGGATCAAATGTTGCGATAAAGAAGCTCATTAGGCTCAGCTGCCAGGGTAATAGAGAATTCATGGCTGAGATGGAAACCTTAGGGAAGATCAAGCACAGAAACCTTGTTCCTTTGTTGGGCTACTGCAAAGTTGGGGAAGAAAGGCTCCTTGTTTACGAGTACATGGAGTACGGAAGCCTAGAAGAAATGCTTCATGGGAGGATAAAGACACAAGATCGACGAATTTTAACATGGGAAGAAAGGAAAAAGATTGCTAGAGGTGCTGCTAAGGGACTTTGTTTTCTGCACCACAATTGCATCCCACACATCATACATAGAGACATGAAATCAAGCAATGTGTTACTTGACCATGAATTGGAGTCTAGAGTCTCCGATTTCGGGATGGCAAGACTAATAAGTGCACTTGACACACATCTTAGTGTAAGCACACTAGCAGGAACACCAGGATATGTTCCACCAGAGTACTACCAAAGTTTCAGGTGCACTTCCAAGGGGGATGTGTACTCATTTGGGGTTGTGTTGTTGGAACTGATCACCGGGAAGCGCCCTACTGATAAGGACGACTTTGGTGACACTAACTTGGTGGGGTGGGCCAAGATTAAGGTACGCGAAGGGAAACAAATGGAAGTGGTTGACCCTGACTTGCTTTCGGTTATTCAAGGAACAGATGAAGCAGAAGTGGAGGGAGTGAAAGAGATGATAAGATCTTTAGAGGTTAGTTTGCGGTGTGTTGATGACTTGCCTTCAAGAAGGCCAAACATGTTGCAGGTAGTTGCTATGCTGAGAGAGCTTATGCCTGCATCAACTGATGGAAGCAACAATAGTGCTTGA 3408 0.4211 MEKNPFHLFPHLTSTLILVMITIMFPIAEKVAAVSSIKTDAESLLMFKKVLKDPNKILSGWQINKNPCSWYGVSCTQGRVTQLDINGNSNLIGTTISLDPLSSLDMLYVLRLSLNGFSVNSTSLLQLPYSLTQLDLSFGGVSGPVPENFFYKCPKLVVVNLSYNNLTGIIPEKLLTSCDKLQVLDMSSNNLTGSISALKIECNSLLQLDLSGNRLSDSIPISLLNCTSLKTLNLANNLISGEIPKGFGQLNKLETLDLSHNQITGWIPSELGNACASLLEVKLFFNNISGSIPSGFSSCNLMQLLDISNNNMSGQLPASIFQNLGSLQELRLGYNAFFGPFPSSISSCKKLRIVDLSSNKISGSIPRDICPGAASLEELRMPDNLITGGIPAELSKCSQLKTLDFSLNYLNGSIPDELGELENLEQLIAWFNGLEGKVPPKLGQCRNLKDLILNNNQLDGRIPIELFNCSNLEWISLTSNGLTGEVPREFGLLTRLAVLQLGNNNFTGEIPGELGNCSSLVWLDLNSNKLTGEIPPRLGRQQGAKSLFGILSGNTLVFLRNVGNSCKGVGGLLEFSGIRPERLLQVPTLRTCDLARLYSGPVLSLFTKYQTLEYLDLSYNELRGKIPDEFGDMVALQVLELSHNQLSGEIPSSLGQLKNMGVFDASHNRLQGEIPDSFSKLSFLVQIDLSSNDLTGQIPQRGQLSTLPATQYANNPGLCGVPLPECQNDNSQATPNPSDDAGKGRQRSAASSWANSIVMGVLIFVASLCLLIVWAIAIRVRRREADEVKMLNSLQASHAATTWKIDKEKEPLSINVATFQRQLRKLKFSQLIEATNGFSAASLIGCGGFGEVFKATLKDGSNVAIKKLIRLSCQGNREFMAEMETLGKIKHRNLVPLLGYCKVGEERLLVYEYMEYGSLEEMLHGRIKTQDRRILTWEERKKIARGAAKGLCFLHHNCIPHIIHRDMKSSNVLLDHELESRVSDFGMARLISALDTHLSVSTLAGTPGYVPPEYYQSFRCTSKGDVYSFGVVLLELITGKRPTDKDDFGDTNLVGWAKIKVREGKQMEVVDPDLLSVIQGTDEAEVEGVKEMIRSLEVSLRCVDDLPSRRPNMLQVVAMLRELMPASTDGSNNSA* 1136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0830 1135 Gene3D - 551 607 - -
Lan1g0830 1135 Pfam Brassinosteroid receptor island domain 548 606 IPR045381 -
Lan1g0830 1135 Pfam Leucine Rich repeat 347 363 IPR001611 GO:0005515
Lan1g0830 1135 Gene3D Phosphorylase Kinase; domain 1 797 913 - -
Lan1g0830 1135 MobiDBLite consensus disorder prediction 725 741 - -
Lan1g0830 1135 PANTHER LEUCINE-RICH RECEPTOR-LIKE KINASE FAMILY PROTEIN 28 1124 - -
Lan1g0830 1135 SUPERFAMILY L domain-like 39 318 - -
Lan1g0830 1135 SUPERFAMILY Protein kinase-like (PK-like) 819 1120 IPR011009 -
Lan1g0830 1135 SUPERFAMILY RNI-like 242 546 - -
Lan1g0830 1135 SMART serkin_6 838 1124 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan1g0830 1135 ProSitePatterns Protein kinases ATP-binding region signature. 844 867 IPR017441 GO:0005524
Lan1g0830 1135 ProSitePatterns Serine/Threonine protein kinases active-site signature. 962 974 IPR008271 GO:0004672|GO:0006468
Lan1g0830 1135 ProSiteProfiles Leucine-rich repeat profile. 252 273 IPR001611 GO:0005515
Lan1g0830 1135 Gene3D Ribonuclease Inhibitor 82 726 IPR032675 -
Lan1g0830 1135 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 28 1124 - -
Lan1g0830 1135 SUPERFAMILY L domain-like 575 723 - -
Lan1g0830 1135 ProSiteProfiles Leucine-rich repeat profile. 204 225 IPR001611 GO:0005515
Lan1g0830 1135 PRINTS Leucine-rich repeat signature 181 194 - -
Lan1g0830 1135 PRINTS Leucine-rich repeat signature 250 263 - -
Lan1g0830 1135 ProSiteProfiles Protein kinase domain profile. 838 1124 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan1g0830 1135 Gene3D Transferase(Phosphotransferase) domain 1 914 1133 - -
Lan1g0830 1135 SMART LRR_typ_2 493 517 IPR003591 -
Lan1g0830 1135 SMART LRR_typ_2 250 274 IPR003591 -
Lan1g0830 1135 SMART LRR_typ_2 324 348 IPR003591 -
Lan1g0830 1135 SMART LRR_typ_2 202 226 IPR003591 -
Lan1g0830 1135 SMART LRR_typ_2 445 469 IPR003591 -
Lan1g0830 1135 SMART LRR_typ_2 633 657 IPR003591 -
Lan1g0830 1135 SMART LRR_typ_2 518 541 IPR003591 -
Lan1g0830 1135 SMART LRR_typ_2 349 372 IPR003591 -
Lan1g0830 1135 Pfam Leucine rich repeat 605 646 IPR001611 GO:0005515
Lan1g0830 1135 Pfam Leucine rich repeat 205 263 IPR001611 GO:0005515
Lan1g0830 1135 Pfam Leucine rich repeat 130 191 IPR001611 GO:0005515
Lan1g0830 1135 MobiDBLite consensus disorder prediction 723 746 - -
Lan1g0830 1135 Pfam Leucine rich repeat N-terminal domain 38 75 IPR013210 -
Lan1g0830 1135 Pfam Protein kinase domain 841 1047 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0830 Lan-Chr1 19072266 19075897 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g0830 44 1129 Receptor kinase-like Gene Family AT1G55610 48.184 0.0 975
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Lan1g0830 Pkinase 5.3e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0830 - - gmx:100789959 1944.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0385 12 9113762 9117410 Lan1g0830 1 19072266 19075897 LSH