Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lan1g0804 | ATGGAAAAAGAGCCTCTACTCCCACATTTGAGTCTCTTATCGGCAAAGAGCGATGAAATCAATATCTCTGTTAACCCAATGGAGTTCAAAGATAGACTCATCTTTGGCCCTTCCTCAAAAGATTCATCTTCTTCACCACCTTTGGTTGAGGCCAAAACAGTTTCCTTTAAACCTTCTTATCCAAACCAAGAAATTCTATTTGATCCACAACAAAAAAACATATCTTCATGCCTTAGTAACCCTGATCATGGATGCCAAAAACCCAGTCTTCACCGGTCTAAAACCGCGCCGGCTAGGACTATTTTAAATGACTTAAATCAGCATCAATCTGAGGAAAGACCCCATTTTGGTACTCAGAGTATTGTTCTCCAAGCTTTTGTTTTTCTTGTTCTTTATTTGTCATTAGGGGTAGTGATTTATTGGTTCAATCGCCATAATTTTTCATCTAGTGAGACTCACCCTATAGTGGATGGTTTATATTTTTGCATAGTCACAATGTGCACAATAGGTTATGGTGACATTACTCCTAACACTACAACAACAAAGCTTTTTGCTATATTGTTTGTGTTGATCGGTTTCGGTTTTATAGACATATTGTTAAGTGGGATGGTTAGTTTTGTCCTTGATTTGCAAGAGAATTATTTGTTGCAAACAGTTAAGGGTAGGGGTCAGAAAAATGGAGGGTCATATTTAGTTGATGTGAAGAAAGGGAGGATGAGGATTAGGTTGAAAGTGGCATTGGCTCTAGGAGTAGTTGTCCTTTGTATTGGATTTGGTGTGGGGGTTCTGCATTTTGTAGAAAGGCTTGATTGGTTGGATTCTTTTTATCTTTCGGTTATGTCGGTTACGACGGTTGGGTATGGTGATAAGGCCTTTAAGACCATTCATGGTCGTATCTTCGCTGCAATTTGGCTACTTGTGTCAACTCTTGCTGTGGCTCGGGCGTTTCTCTATTTGGCCGAGGCGAGAATTGATAAGAGGCATAGAATGATGGCGAAGTGGATTCTCGGTCAGGATATGACTGTTTCTGAGTTTCTTGCTGCAGACATTGACAATGATGGCTTTGTGAGTAAATCAGAATATGTTGTATACAAGCTGAAGGAATTGGGTAAAGTATCAGATAAGGACATTATGGAGGTTAGTGAAACATTTGACAGATTAGATTCTGGCAACTTTGGAAAGATAAAACTTATGGATCTCATGGAGACTCATCATTCATGA | 1221 | 0.3931 | MEKEPLLPHLSLLSAKSDEINISVNPMEFKDRLIFGPSSKDSSSSPPLVEAKTVSFKPSYPNQEILFDPQQKNISSCLSNPDHGCQKPSLHRSKTAPARTILNDLNQHQSEERPHFGTQSIVLQAFVFLVLYLSLGVVIYWFNRHNFSSSETHPIVDGLYFCIVTMCTIGYGDITPNTTTTKLFAILFVLIGFGFIDILLSGMVSFVLDLQENYLLQTVKGRGQKNGGSYLVDVKKGRMRIRLKVALALGVVVLCIGFGVGVLHFVERLDWLDSFYLSVMSVTTVGYGDKAFKTIHGRIFAAIWLLVSTLAVARAFLYLAEARIDKRHRMMAKWILGQDMTVSEFLAADIDNDGFVSKSEYVVYKLKELGKVSDKDIMEVSETFDRLDSGNFGKIKLMDLMETHHS* | 407 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lan1g0804 | 406 | SUPERFAMILY | Voltage-gated potassium channels | 236 | 341 | - | - | |
Lan1g0804 | 406 | Gene3D | - | 313 | 406 | - | - | |
Lan1g0804 | 406 | SUPERFAMILY | Voltage-gated potassium channels | 122 | 213 | - | - | |
Lan1g0804 | 406 | Gene3D | - | 103 | 226 | - | - | |
Lan1g0804 | 406 | SUPERFAMILY | EF-hand | 343 | 403 | IPR011992 | - | |
Lan1g0804 | 406 | Pfam | Ion channel | 251 | 320 | IPR013099 | - | |
Lan1g0804 | 406 | Pfam | Ion channel | 128 | 207 | IPR013099 | - | |
Lan1g0804 | 406 | PANTHER | TWO-PORE POTASSIUM CHANNEL 3 | 73 | 400 | - | - | |
Lan1g0804 | 406 | PRINTS | Two pore domain K+ channel signature | 164 | 192 | IPR003280 | GO:0005267|GO:0016020|GO:0071805 | |
Lan1g0804 | 406 | PRINTS | Two pore domain K+ channel signature | 283 | 292 | IPR003280 | GO:0005267|GO:0016020|GO:0071805 | |
Lan1g0804 | 406 | ProSitePatterns | EF-hand calcium-binding domain. | 349 | 361 | IPR018247 | - | |
Lan1g0804 | 406 | Gene3D | - | 250 | 312 | - | - | |
Lan1g0804 | 406 | PANTHER | POTASSIUM CHANNEL, SUBFAMILY K | 73 | 400 | IPR003280 | GO:0005267|GO:0016020|GO:0071805 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lan1g0804 | Lan-Chr1 | 18735524 | 18737493 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lan1g0804 | 20 | 402 | Ion Channels | AT4G18160 | 59.596 | 1.20e-165 | 470 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lan1g0804 | K05389 | - | gmx:100804249 | 558.91 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lan12g0298 | 12 | 7022895 | 7029659 | Lan1g0804 | 1 | 18735524 | 18737493 | LSH |