Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0804 ATGGAAAAAGAGCCTCTACTCCCACATTTGAGTCTCTTATCGGCAAAGAGCGATGAAATCAATATCTCTGTTAACCCAATGGAGTTCAAAGATAGACTCATCTTTGGCCCTTCCTCAAAAGATTCATCTTCTTCACCACCTTTGGTTGAGGCCAAAACAGTTTCCTTTAAACCTTCTTATCCAAACCAAGAAATTCTATTTGATCCACAACAAAAAAACATATCTTCATGCCTTAGTAACCCTGATCATGGATGCCAAAAACCCAGTCTTCACCGGTCTAAAACCGCGCCGGCTAGGACTATTTTAAATGACTTAAATCAGCATCAATCTGAGGAAAGACCCCATTTTGGTACTCAGAGTATTGTTCTCCAAGCTTTTGTTTTTCTTGTTCTTTATTTGTCATTAGGGGTAGTGATTTATTGGTTCAATCGCCATAATTTTTCATCTAGTGAGACTCACCCTATAGTGGATGGTTTATATTTTTGCATAGTCACAATGTGCACAATAGGTTATGGTGACATTACTCCTAACACTACAACAACAAAGCTTTTTGCTATATTGTTTGTGTTGATCGGTTTCGGTTTTATAGACATATTGTTAAGTGGGATGGTTAGTTTTGTCCTTGATTTGCAAGAGAATTATTTGTTGCAAACAGTTAAGGGTAGGGGTCAGAAAAATGGAGGGTCATATTTAGTTGATGTGAAGAAAGGGAGGATGAGGATTAGGTTGAAAGTGGCATTGGCTCTAGGAGTAGTTGTCCTTTGTATTGGATTTGGTGTGGGGGTTCTGCATTTTGTAGAAAGGCTTGATTGGTTGGATTCTTTTTATCTTTCGGTTATGTCGGTTACGACGGTTGGGTATGGTGATAAGGCCTTTAAGACCATTCATGGTCGTATCTTCGCTGCAATTTGGCTACTTGTGTCAACTCTTGCTGTGGCTCGGGCGTTTCTCTATTTGGCCGAGGCGAGAATTGATAAGAGGCATAGAATGATGGCGAAGTGGATTCTCGGTCAGGATATGACTGTTTCTGAGTTTCTTGCTGCAGACATTGACAATGATGGCTTTGTGAGTAAATCAGAATATGTTGTATACAAGCTGAAGGAATTGGGTAAAGTATCAGATAAGGACATTATGGAGGTTAGTGAAACATTTGACAGATTAGATTCTGGCAACTTTGGAAAGATAAAACTTATGGATCTCATGGAGACTCATCATTCATGA 1221 0.3931 MEKEPLLPHLSLLSAKSDEINISVNPMEFKDRLIFGPSSKDSSSSPPLVEAKTVSFKPSYPNQEILFDPQQKNISSCLSNPDHGCQKPSLHRSKTAPARTILNDLNQHQSEERPHFGTQSIVLQAFVFLVLYLSLGVVIYWFNRHNFSSSETHPIVDGLYFCIVTMCTIGYGDITPNTTTTKLFAILFVLIGFGFIDILLSGMVSFVLDLQENYLLQTVKGRGQKNGGSYLVDVKKGRMRIRLKVALALGVVVLCIGFGVGVLHFVERLDWLDSFYLSVMSVTTVGYGDKAFKTIHGRIFAAIWLLVSTLAVARAFLYLAEARIDKRHRMMAKWILGQDMTVSEFLAADIDNDGFVSKSEYVVYKLKELGKVSDKDIMEVSETFDRLDSGNFGKIKLMDLMETHHS* 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0804 406 SUPERFAMILY Voltage-gated potassium channels 236 341 - -
Lan1g0804 406 Gene3D - 313 406 - -
Lan1g0804 406 SUPERFAMILY Voltage-gated potassium channels 122 213 - -
Lan1g0804 406 Gene3D - 103 226 - -
Lan1g0804 406 SUPERFAMILY EF-hand 343 403 IPR011992 -
Lan1g0804 406 Pfam Ion channel 251 320 IPR013099 -
Lan1g0804 406 Pfam Ion channel 128 207 IPR013099 -
Lan1g0804 406 PANTHER TWO-PORE POTASSIUM CHANNEL 3 73 400 - -
Lan1g0804 406 PRINTS Two pore domain K+ channel signature 164 192 IPR003280 GO:0005267|GO:0016020|GO:0071805
Lan1g0804 406 PRINTS Two pore domain K+ channel signature 283 292 IPR003280 GO:0005267|GO:0016020|GO:0071805
Lan1g0804 406 ProSitePatterns EF-hand calcium-binding domain. 349 361 IPR018247 -
Lan1g0804 406 Gene3D - 250 312 - -
Lan1g0804 406 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 73 400 IPR003280 GO:0005267|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0804 Lan-Chr1 18735524 18737493 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g0804 20 402 Ion Channels AT4G18160 59.596 1.20e-165 470
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0804 K05389 - gmx:100804249 558.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0298 12 7022895 7029659 Lan1g0804 1 18735524 18737493 LSH