Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0794 ATGGTGAAAATCTCTGTAGGTAGATACGATGATGGAGAAGGACCTAGCAACCCAACCCAGAAACGAAGAAGGTTGCATCAAGATGAAACTGATGAAGAAGAAGAAGAAGAAAATCAACAACAACAACAACAAGAAGAAGAACAAGAACAACAACCTCAACAAGAACAACAACAACCTCAACAAGAACAACAACAACAACAACAACAACAAGGATTTGGAATTGAAACAACCGAGGAAGATAGAACAACTGAGGAGGATAATGAAATTGGTGAATCAAATACTAGGGACAGATCAATTTCTATTACCCTTATGGATCCTGATGTGCTTGATTGCTGCATTTGTTATGAACCCTTTAGTGCCCCTATCTTTCAGTGCGAGAATGGGCATATTGCTTGCTCCAACTGCTGTGGCAAACTTGGGAACAAGTGTCCCATGTGCTCAATGCCGATTGGTTATAACCGTTGCCGAGCTATTGAGAAGGTCCTGGAATCTATTAAAATGTCATGCCTGAATACAAAATATGGTTGTAAAGAGAAGTTTAATTACAGTAAGAAAAATGAGCACGAGAAGGAATGCATCTATATACCATGTTTATGCCCACATCCGGGTTGTGACTTCATTGCTGCGTCCAAGGAGTTATCCCTCCACTTCAGCCATAGACATGTAGGTTCTGCGATACCATTTGTATACGATAAATTTCTCCCTGTTGTCTTAAATATTGACCACAAAGAAATTATCCTTCAAGAGAAAAATGATGGTAGCTTGTTTGTTGTTCGCAATAGCCGTGAGCATCTGGGTAACATAGTCCATCTTAGTTGCATTGGCCCGAAACCGATAAGAGGGTTTCATTATGAGATATTGGCTAGGTCTCAGGGAAGCTCTCTAATACTGACATCTCTGACCAAGATCATTCAAGGCTTCTTACCCGATTCTCCTTCAACAGGGCGCCTTTTGATTCCATCTGATTTCTTCGGTTCTGGAACACTCAAACTGGATATCCGCATAAGGTCTCGACAATAA 1020 0.4078 MVKISVGRYDDGEGPSNPTQKRRRLHQDETDEEEEEENQQQQQQEEEQEQQPQQEQQQPQQEQQQQQQQQGFGIETTEEDRTTEEDNEIGESNTRDRSISITLMDPDVLDCCICYEPFSAPIFQCENGHIACSNCCGKLGNKCPMCSMPIGYNRCRAIEKVLESIKMSCLNTKYGCKEKFNYSKKNEHEKECIYIPCLCPHPGCDFIAASKELSLHFSHRHVGSAIPFVYDKFLPVVLNIDHKEIILQEKNDGSLFVVRNSREHLGNIVHLSCIGPKPIRGFHYEILARSQGSSLILTSLTKIIQGFLPDSPSTGRLLIPSDFFGSGTLKLDIRIRSRQ* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0794 339 ProSiteProfiles Zinc finger RING-type profile. 111 147 IPR001841 -
Lan1g0794 339 MobiDBLite consensus disorder prediction 44 76 - -
Lan1g0794 339 ProSiteProfiles Zinc finger SIAH-type profile. 164 222 IPR013010 GO:0008270
Lan1g0794 339 Pfam Seven in absentia protein family 154 222 IPR018121 GO:0005737|GO:0006511|GO:0007275
Lan1g0794 339 SUPERFAMILY RING/U-box 110 153 - -
Lan1g0794 339 MobiDBLite consensus disorder prediction 15 29 - -
Lan1g0794 339 PANTHER E3 UBIQUITIN-PROTEIN LIGASE SINA-LIKE 4 37 338 IPR044286 -
Lan1g0794 339 PANTHER E3 UBIQUITIN-PROTEIN LIGASE SINA-LIKE 4 37 338 - -
Lan1g0794 339 Coils Coil 23 51 - -
Lan1g0794 339 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 159 217 IPR013083 -
Lan1g0794 339 MobiDBLite consensus disorder prediction 1 98 - -
Lan1g0794 339 SUPERFAMILY TRAF domain-like 164 336 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g0794 107 224 C3H Transcription Factor Family AT2G41980 33.582 1.02e-17 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0794 K04506 - gmx:100797881 396.356