Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0788 ATGGAATTCAAGCTTAACATGAATCCTAAGAAGAAACCCCTCAAACCCCATCTTCAACGCCTCAACGCTCTTAAGAACTTCGATTACCAACCTCCAACAACACCCACCACTTCATCTCTCACCACTTCTTCTTCATTGGAGAATGAAAATGATTTCAGGGTCACTGGAAATGATGGTGAATTCGAACGAATCTTCCAAAGTTTGGGTCTTTCTGGACCTGAAGACTTTGCTATTCCAACTGCAGATTGGAAAGCTCGAAAGGCTCGTTTTTCTGCTTCTTCTAATCATGGTAAGAACAAGTTAAACGAAGAGGGTGAAGTTAGAGTTCATGTTTTAGATGAATTAGGAAATGGGGTTGTTAAAAATCAGAACTTTTTTATACCCTTTGAAGGGGAAGATGTTTCTTATGATTCTAAGGTTTTGGGTTGTGAAAATGAAGATGGGGTTTTAGGAAGAGGGGTTAATGGTGTTAGGCCTTCAATTTTGGTGGGTTCTAGTTGGGGTTTGAATTTGGTGAGGAATTTTGATGATAGTGGTGGTGGTGGTGGTGTTGGTGTTGTTGATTTGTTGTGTTCTTCAAGTGAACATGATGTTGTTGGTAGAGTGAGGAATGGGGAAAGGAGCATGATTTTTTCTGATTCGGGTTCGTTTACGACTTCGCATGATGATGATAGTGATGTTGGTGGTGAAAGGGGTTGTTCTGGTTCTGGTGTGGTTCATGAGTTGGTTCATAATGTTGTCTCAGAAAATGGTTGGCTCAGGAGATCTTTCTCTTCGTGGCAAAAGGGTGATGTTTTGGGAAAAGGGTCTTTTGGAACTGTATATGAAGGCTTTACTGATGATGGATTCTTTTTTGCGGTAAAGGAGGTGTCTTTGCTGGATGAAGGTAACCATGGCAAACAGAGCATTTTCCAACTTCAGCAGGAAATATCTCTTTTGAGTCAATTTGAACATGAAAACGTAGTCCAATATTTAGGCACACACAAGGACAAAAGTACACTATATATCTTCCTTGAGTATGTGTCAAAAGGGTCATTGGCAAGTCTCTATCGAAAGTATCGTTTGAATGATTCTCAAGTTTCTGCATACACTAGGCAGATTATAAGCGGCTTGAAGTATCTTCATGATCGTAATGTGGTCCACAGGGATATCAAGTGTGCTAATATACTTGTTGATGTGAGTGGATCAGTCAAGCTTGCAGATTTTGGGTTGGCAAAGGCAACCAAATTGAATGATGTTAAATCAAGCAAAGGCTCTCCGTACTGGATGGCCCCTGAGGTTGTTAACTTAAAGAACCAAGGTTATGGGCTAGCCGCTGATATATGGAGCTTAGGGTGTACAGTTTTAGAGATGTTGACAAGACAGCCTCCTTATTCTGATTTGGAAGGGATGCAAGCATTATTTCGGATTGGCCGGGGTGAACTTCCACCTATTCCCGAATCCTTATCTAAAGATGCTCGAGATTTCATTCTTAAATGCTTGCAAGTTAACCCGAATAAACGCCCAACCGCAGCTCAGCTAATGTATCATCCATTTATAAGGAGACCATTTCTATCTCCTGCGAGTCCTGCTTCTCCACATAGAAATATCTTTCGGTATTAA 1602 0.4095 MEFKLNMNPKKKPLKPHLQRLNALKNFDYQPPTTPTTSSLTTSSSLENENDFRVTGNDGEFERIFQSLGLSGPEDFAIPTADWKARKARFSASSNHGKNKLNEEGEVRVHVLDELGNGVVKNQNFFIPFEGEDVSYDSKVLGCENEDGVLGRGVNGVRPSILVGSSWGLNLVRNFDDSGGGGGVGVVDLLCSSSEHDVVGRVRNGERSMIFSDSGSFTTSHDDDSDVGGERGCSGSGVVHELVHNVVSENGWLRRSFSSWQKGDVLGKGSFGTVYEGFTDDGFFFAVKEVSLLDEGNHGKQSIFQLQQEISLLSQFEHENVVQYLGTHKDKSTLYIFLEYVSKGSLASLYRKYRLNDSQVSAYTRQIISGLKYLHDRNVVHRDIKCANILVDVSGSVKLADFGLAKATKLNDVKSSKGSPYWMAPEVVNLKNQGYGLAADIWSLGCTVLEMLTRQPPYSDLEGMQALFRIGRGELPPIPESLSKDARDFILKCLQVNPNKRPTAAQLMYHPFIRRPFLSPASPASPHRNIFRY* 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0788 533 MobiDBLite consensus disorder prediction 27 50 - -
Lan1g0788 533 ProSitePatterns Serine/Threonine protein kinases active-site signature. 379 391 IPR008271 GO:0004672|GO:0006468
Lan1g0788 533 PANTHER SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 147 515 - -
Lan1g0788 533 PANTHER SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 9 140 - -
Lan1g0788 533 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 9 140 - -
Lan1g0788 533 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 147 515 - -
Lan1g0788 533 ProSitePatterns Protein kinases ATP-binding region signature. 266 288 IPR017441 GO:0005524
Lan1g0788 533 PRINTS Tyrosine kinase catalytic domain signature 338 351 IPR001245 GO:0004672|GO:0006468
Lan1g0788 533 PRINTS Tyrosine kinase catalytic domain signature 373 391 IPR001245 GO:0004672|GO:0006468
Lan1g0788 533 PRINTS Tyrosine kinase catalytic domain signature 439 461 IPR001245 GO:0004672|GO:0006468
Lan1g0788 533 PRINTS Tyrosine kinase catalytic domain signature 482 504 IPR001245 GO:0004672|GO:0006468
Lan1g0788 533 Pfam Protein kinase domain 261 513 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan1g0788 533 SMART serkin_6 260 513 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan1g0788 533 ProSiteProfiles Protein kinase domain profile. 260 513 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan1g0788 533 SUPERFAMILY Protein kinase-like (PK-like) 246 525 IPR011009 -
Lan1g0788 533 Gene3D Transferase(Phosphotransferase) domain 1 257 526 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0788 Lan-Chr1 18527329 18535494 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g0788 257 517 MAP Kinase Kinase Kinase AT4G08500 67.939 7.21e-127 382
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Lan1g0788 Pkinase 2.4e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0788 - K13414 aip:107631583 662.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g0699 18 12247006 12254017 Lan1g0788 1 18527329 18535494 LSH