Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0787 ATGGGTAAAGAAGAAGAAGAAGAATTTACAAAGATGGAAATTGATCTCTCTTTGAAGATAGACCCTGATGAGCATAATGAAGAAGAAGAAGAAGAAGCAAAGGTAGATGAGAGAGTGGAAGAGAATGATGAGGTGCAAGAAATAGCAAGGAAAGAGAATAATGAATATGTTCCTGAAGCCATAGGTGGTGAAATTGAAGATGATGCTTCAGTAGTAGAATTATCTTTGCAAGATAACACAAAAACAAAAGAGTTAAGTATATTACAAATGGAGATGGAGAACATGAAAGAGGAAAACAAAGTTCTAAGGAAAGTGGTGGAACAAACAATGAAAGACTACTATGATCTACAAATGAAATTTTCAATCATCCAAGAAAACAATAAAAGAAAGGATCATCAAATTTCTCTCTCACTTGAAGACATAATAACCACTAGCAATGAAGGATCATCAAGAATTTTTGAGATCTTCAACAATACCAAAATCCATAGAGCTCTTCCATCTCCACCAAACACCAATAATGAAAGTTTAAGTGAGAGTGAATTGGGTTTATCACTAAGGTTACAACAGACTCATAACTTGTCTAGTGTTTCTACACATGTTGCTGCATCCCCTCCTAATAGAAAGGCTAGGGTTTCAGTCAGAGCAAGATGTGAAACAGCCACAATGAATGATGGATGCCAATGGAGAAAATATGGACAGAAAATTGCAAAAGGAAATCCATGTCCAAGAGCCTATTATCGTTGCACTGTGGTACCAGGGTGCCCCGTTAGGAAACAGGTGCAAAGATGCATAGATGATATGTCCATACTAATTACAACATATGAAGGAACACATAATCATCCACTCCCTGTTGGTGCAACTGCTATGGCTTCAACAGCATCAACAAGTTCCTTTGTATTGTTGGATTCAAGCAACCCTATTTCTGATATTGGCACCTCTAGTTTCACTCAACCATCATCATTTCCATACAACAATAGCTTCCACTCATTAAACCCACCTTCCAATTTTAGGACCATAAACCATAATAATGACCCTTCCAAAGGGTTTGTTCTTGATCTCACCAATAATCTCAATGACCCTCTACATTTTCCTATTGGCATAAGGTCCTCCAATGCAACAAATGAACCTTGTTTTTCTTGGATGGAAAACAAGTACCAAAGTGATGGTAGTAGTGCAATAATGGACAATTTTCACAACCCTAGTACTAGTTATAGACCAGTAGTGGATCAAGATCATGAGCACAATGTTTCTGCAATTGCCTCAGATCCTAAGTTTAGGAATGCGGTTGCGGCAGCCATAACATCACTGATGAATAAAGAGAGTCATGGTGGTACTTCCTTTGGTACTAGGAGTGGCCAAAATGGTATCTCTAGTAGCAACAACAATTGGGTCTTAGATTCTCTTTCAAAAAATGGTAAGTCTACTTGA 1428 0.3768 MGKEEEEEFTKMEIDLSLKIDPDEHNEEEEEEAKVDERVEENDEVQEIARKENNEYVPEAIGGEIEDDASVVELSLQDNTKTKELSILQMEMENMKEENKVLRKVVEQTMKDYYDLQMKFSIIQENNKRKDHQISLSLEDIITTSNEGSSRIFEIFNNTKIHRALPSPPNTNNESLSESELGLSLRLQQTHNLSSVSTHVAASPPNRKARVSVRARCETATMNDGCQWRKYGQKIAKGNPCPRAYYRCTVVPGCPVRKQVQRCIDDMSILITTYEGTHNHPLPVGATAMASTASTSSFVLLDSSNPISDIGTSSFTQPSSFPYNNSFHSLNPPSNFRTINHNNDPSKGFVLDLTNNLNDPLHFPIGIRSSNATNEPCFSWMENKYQSDGSSAIMDNFHNPSTSYRPVVDQDHEHNVSAIASDPKFRNAVAAAITSLMNKESHGGTSFGTRSGQNGISSSNNNWVLDSLSKNGKST* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0787 475 Pfam WRKY DNA -binding domain 223 281 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan1g0787 475 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 13 192 IPR044810 GO:0003700
Lan1g0787 475 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 199 469 IPR044810 GO:0003700
Lan1g0787 475 SMART WRKY_cls 222 282 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan1g0787 475 SUPERFAMILY WRKY DNA-binding domain 215 283 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan1g0787 475 Gene3D WRKY domain 207 284 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan1g0787 475 MobiDBLite consensus disorder prediction 1 48 - -
Lan1g0787 475 PANTHER WRKY TRANSCRIPTION FACTOR 9-RELATED 13 192 - -
Lan1g0787 475 PANTHER WRKY TRANSCRIPTION FACTOR 9-RELATED 199 469 - -
Lan1g0787 475 Coils Coil 85 112 - -
Lan1g0787 475 MobiDBLite consensus disorder prediction 24 38 - -
Lan1g0787 475 ProSiteProfiles WRKY domain profile. 217 283 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan1g0787 475 MobiDBLite consensus disorder prediction 1 23 - -
Lan1g0787 475 MobiDBLite consensus disorder prediction 440 475 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0787 Lan-Chr1 18505116 18508240 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g0787 88 331 WRKY Transcription Factor Family AT1G68150 53.285 7.29e-85 264
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lan1g0787 WRKY 3.6e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0787 - - lang:109350732 870.152
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0268 12 6404335 6407523 Lan1g0787 1 18505116 18508240 LSH