Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0781 ATGGATTTAGAAGAGAAATTCCTTGCTAAAGAGACTTACTTTAAGTTGGTTTTTATTTCTGTCCAGAGTACTCCAGAAAAGAATGGCCATTCAGATGATGCTTCAAAAAGTTCAGAACTCTCTCAGGAGTTCCTGAAGTCTGGTTCAAAGAAGGAACTTATTCGAACATGCTTCGGTAAGGACAAAAAGAAAGTTTCATCAAAAAGCAAGATGTCTGACTCGAAGTCAATTGGTAAGGTTATTAAGAAACAAGAATCCAAGCAAGTTTCCAGTCTCAGCCATCAACCTCCTAGGAAGCAACACCGCAAGGGTGAAAACCCCACACGGCTGATATCTACTCCTGATCGATCTTCTGATTTTGGACATTCAAACTCTTGGATCTGTAAAAATGCTGCTTGTAGGGCAGTTCTATCTATAGATGACACATTTTGTAGAAGATGCTCTTGCTGTATTTGTCACCTTTTTGATGATAACAAGGATCCTAGTCTTTGGTTGGTATGCACATCTGAATATACTCAAGGGGACTCCTGTGGGCTGTCTTGTCATATCGAGTGTGCCCTCCGACATGAAAAAGTTGGAGTTATTGATCATAGGCAACTGATGCAACTAGATGGTGGTTATTGTTGTGCATCCTGTGGTAAAGTTACAGGGATACTTGGATGCTGGAAAAAGCAACTAAATATAGCAAAAGATGCCCGGCGTGTAGATGGACTCAGCTACAGGATATATTTGAGCTACAGGCTACTGGACGGAACATCGAAATTTAAAGAATTGCATCAAATTGTACAAGAGGCTAAGGCTAAACTGGAGACAGAAGTTGGTCCAGTTAATGGTGTTTCTGCGAAGATGGCACGAGGCATTGTTAGCAGACTCTCTGTTGCCAGTGAGGTGCAGAAACTATGCTCTCTTGCTATTGAGAAAGCTGATAGCTGGCTGGCCACTGTTCCCAATGTAAATCCAGATTCCACAGAGGGTTCACTTCCTGCTGCTTGCAAGTTTTTTTTTGAAGAGGTAACAGCTTCCTCGGTGAAAATCATTTTAATTGAAATATCAAATGTATATTTTGAGGACATTAAGGGATACAAGCTCTGGTATTACAAGAAAGGGGAGGAGTTGGACACAAAAGAACCTGTTTCTGTGTTCCCTAAATCTCAGAGGAGGATTTTGATATCTAACCTTCAGCCTTGCACTGAATATACTTTTCGGATAATATCTTACACTGATTCGGGTGACCTGGGACATTCTGAGGCTAAGTGTTTCACCAAGAGCATCGAGATAATTCAAAAGAATCCCTCTTCATCTGTTGTTATGAATCAAAGAAAAGAGAATATTCAAACTGGAGGCAGTTCTTCTGGCTCCAAAATGGAGCTACATCCAATAATGGAAGACTCTGGATTTAAGGTTCGAGACCTTGGGAAAATTTTACGTTTTGCTTGGGCTCAAGAGCAAGGTTACTTTGAGAAGTTTTGTTGTGCTGATAAGAAAATTTGTCATGGACAGAGTGAGATGGTCAAGCCAAAAATTCCAGAAGAGAAGTTGCCTTCAGTTTCACGAGACCTTGATTTAAATGTTGCTTCAGTTCCTGATTTAAATGAAGAGTTGACACCTCCTTTTGAGTCTTCCAGGGATGAAGATAATTGCTACACTTCGCTGCAGGCAGTTGAGGCAGATGATGATGCTGCTTCTCGCGATATAGAGAAAAACGGTTTAGCAAGATCACATGGGAGTGATGACTCACAAACCTGGACCCGCGGTCCTGCCAGAGAAGTGCCAGCTGTTGATTCTCGTGTAGATGTAGGCAGGAAAAGGATAGCAAGCAGAAACGAAGAGACACATGATTGTGACAGCACTTTGATAACTGGCTCTCCTTTATGCAGATCTGATGGTTCCATCTCTTTGAATGAAAACTTTGAGTATTGTGTGAAAGTAATTCGCTGGCTAGAATGTGAGGGTCACATCAAACAGGAATTTAGATTGAAATTGCTAACATGGTTTAGTTTGAGGTCGACAGAACAAGAACGCAGGGTGGTTAATACCTTCATTCAGACTCTTATCGATGATCCGAGTAGTTTGGCAGGGCAACTGGTTGACTCTTTCTCTGATATTATATCTAACAAGAAGCCAAGAAATGGACTCTGTAATAAGGCTGGGGCATCAAATTAA 2163 0.4124 MDLEEKFLAKETYFKLVFISVQSTPEKNGHSDDASKSSELSQEFLKSGSKKELIRTCFGKDKKKVSSKSKMSDSKSIGKVIKKQESKQVSSLSHQPPRKQHRKGENPTRLISTPDRSSDFGHSNSWICKNAACRAVLSIDDTFCRRCSCCICHLFDDNKDPSLWLVCTSEYTQGDSCGLSCHIECALRHEKVGVIDHRQLMQLDGGYCCASCGKVTGILGCWKKQLNIAKDARRVDGLSYRIYLSYRLLDGTSKFKELHQIVQEAKAKLETEVGPVNGVSAKMARGIVSRLSVASEVQKLCSLAIEKADSWLATVPNVNPDSTEGSLPAACKFFFEEVTASSVKIILIEISNVYFEDIKGYKLWYYKKGEELDTKEPVSVFPKSQRRILISNLQPCTEYTFRIISYTDSGDLGHSEAKCFTKSIEIIQKNPSSSVVMNQRKENIQTGGSSSGSKMELHPIMEDSGFKVRDLGKILRFAWAQEQGYFEKFCCADKKICHGQSEMVKPKIPEEKLPSVSRDLDLNVASVPDLNEELTPPFESSRDEDNCYTSLQAVEADDDAASRDIEKNGLARSHGSDDSQTWTRGPAREVPAVDSRVDVGRKRIASRNEETHDCDSTLITGSPLCRSDGSISLNENFEYCVKVIRWLECEGHIKQEFRLKLLTWFSLRSTEQERRVVNTFIQTLIDDPSSLAGQLVDSFSDIISNKKPRNGLCNKAGASN* 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0781 720 PANTHER VIN3-LIKE PROTEIN 1 55 715 - -
Lan1g0781 720 SUPERFAMILY Fibronectin type III 336 416 IPR036116 GO:0005515
Lan1g0781 720 Pfam PHD - plant homeodomain finger protein 128 246 IPR032881 -
Lan1g0781 720 Gene3D Immunoglobulins 314 417 IPR013783 -
Lan1g0781 720 MobiDBLite consensus disorder prediction 568 588 - -
Lan1g0781 720 PANTHER VIN3-LIKE PROTEIN 2-RELATED 55 715 IPR044514 GO:0010048|GO:0040029
Lan1g0781 720 ProSiteProfiles Fibronectin type-III domain profile. 327 426 IPR003961 GO:0005515
Lan1g0781 720 MobiDBLite consensus disorder prediction 24 117 - -
Lan1g0781 720 MobiDBLite consensus disorder prediction 29 82 - -
Lan1g0781 720 CDD FN3 357 411 IPR003961 GO:0005515
Lan1g0781 720 CDD PHD_VIN3_plant 148 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0781 Lan-Chr1 18371945 18381963 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g0781 124 712 PHD Gene Family AT3G24440 49.088 6.39e-178 520
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0781 - - gmx:100780157 1159.44