Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0780 ATGGCTGCAAATACACCCTGTGGTTTAGTATCTCTAAACCATGTAGGAGTAGTTCCAAAAAACGAAAAAGAAATGGAACAAAATCAAACCCAAATGACCAAAGACAATAACACAAATATTGACTACACACAAAGAGCACAATGGCTTCGTGCTGCTGTTTTAGGAGCCAATGATGGTTTAGTTTCTGTTGCTTCATTGATGATGGGTGTTGGAGCTGTTAAAAGAGATGTTAAAGCCATGTTACTTGCTGGTTTTGCAGGATCCATTGCAGGAGCTTGTGGCATGGCTATAGGAGAGTTTGTTTCTGTTTATACTCAATATGAAGTTGAGGTTAGTCAAATGAAAAGAGACATGGATATGAGTGGTTACAAAGAGTGTGAGAAAGTAGAGTTTGAGATGAGAATGGAGAAAAGAAGAACATTACCTAATCCAATGCATGCTGCTTTAGCATCTGCTTTGTCTTTTACTATGGGTGCATTGGTTCCTTTACTTTCAGCTGCATTCATAAGTGATTATAAGATAAGGCTTTTGGTGGTTGTGGCTATGGCTAGCTTGGCTTTGGTGATCATTGGAATTTTGGGTGCTGAGTTGGGAAAGACACCTAAGTTATGGTCTTGTGTTAGGGTCCTTGTTGGAGGGTGGATGGCTATGGCTGTTACTTTTGGGTTAACCAAATCAATAGGTTCTAGTGGGTTGGAATTATGA 705 0.3972 MAANTPCGLVSLNHVGVVPKNEKEMEQNQTQMTKDNNTNIDYTQRAQWLRAAVLGANDGLVSVASLMMGVGAVKRDVKAMLLAGFAGSIAGACGMAIGEFVSVYTQYEVEVSQMKRDMDMSGYKECEKVEFEMRMEKRRTLPNPMHAALASALSFTMGALVPLLSAAFISDYKIRLLVVVAMASLALVIIGILGAELGKTPKLWSCVRVLVGGWMAMAVTFGLTKSIGSSGLEL* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0780 234 CDD Nodulin-21 47 202 - -
Lan1g0780 234 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 1 229 IPR008217 GO:0005384|GO:0030026
Lan1g0780 234 Pfam VIT family 49 118 IPR008217 GO:0005384|GO:0030026
Lan1g0780 234 Pfam VIT family 130 224 IPR008217 GO:0005384|GO:0030026
Lan1g0780 234 PANTHER VACUOLAR IRON TRANSPORTER HOMOLOG 2.1 1 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0780 Lan-Chr1 18281083 18281866 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g0780 25 232 Nodulin-like Gene Family AT3G43660 60.377 3.14e-86 252
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0780 K22736 - gmx:100791523 285.804