Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lan1g0771 | ATGGAAGTAGAAAGGAATCATCAATGGTCTCTCAACGATTTCGAAATCGGAAAACCACTCGGGAGAGGGAAATTCGGCAGAGTCTACGTCGCCAGAGAACACAAGGTTATTTTTAAGCAACAGCTTGAGAAGTACAGGATTCAAAATCAACTGAGGAGAGAGATGGAGATACAGAAGAGTCTTAACCACCCAAACGTCCTGCGTCTCTATGGTTGGTTTCATGATGCTGACCGTGTTTTCTTGATTCTTGAATATGCTCATAATGGCGAGCTTTATAAGGAGCTTAGCAAAAGAGGTCATCTCACCGAGAAGCATGCTGCCACGTATATTTTGAGTCTCACAAAGGCATTGGCATATTGTCACGAGAAGCATGTTATTCATAGGGATATCAAGCCTGAAAATTTGCTGCTTGACCATGAGGGTCGTCTTAAAATTGCAGACTTTGGTTGGTCTGTACAGTCCAGAAACAAAAGAAATACCATGTGTGGAACATTGGATTATTTAGCACCAGAAATGGTAGAAAACAAAGCTCATGATTATGCAGTTGATAACTGGACTCTTGGCATCCTTTGTTATGAATTCCTCTATGGTGTTCCTCCATTTGAGGCTGAGAGTCAAGCCGATACCTTCAAAAGGATAATCAAGATTGACCTAAGGTTCCCTTCTAATCCTTTAGTTTCTTCAGATGCCAAAAATCTGATCAGTCGGCTCCTTGTGAAAGACTCCTCACAGAGGCTCTCTCTTCAGAAGATAATGGAGCATCCTTGGATAATCAAGAATGCAAATCCTACAGGTATTTGCAACTAG | 807 | 0.4164 | MEVERNHQWSLNDFEIGKPLGRGKFGRVYVAREHKVIFKQQLEKYRIQNQLRREMEIQKSLNHPNVLRLYGWFHDADRVFLILEYAHNGELYKELSKRGHLTEKHAATYILSLTKALAYCHEKHVIHRDIKPENLLLDHEGRLKIADFGWSVQSRNKRNTMCGTLDYLAPEMVENKAHDYAVDNWTLGILCYEFLYGVPPFEAESQADTFKRIIKIDLRFPSNPLVSSDAKNLISRLLVKDSSQRLSLQKIMEHPWIIKNANPTGICN* | 269 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lan1g0771 | 268 | Pfam | Protein kinase domain | 14 | 257 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Lan1g0771 | 268 | PIRSF | ILK | 2 | 261 | - | - | |
| Lan1g0771 | 268 | PANTHER | SERINE/THREONINE-PROTEIN KINASE IAL-RELATED | 6 | 266 | IPR030616 | GO:0004672 | |
| Lan1g0771 | 268 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 125 | 137 | IPR008271 | GO:0004672|GO:0006468 | |
| Lan1g0771 | 268 | SMART | serkin_6 | 14 | 257 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Lan1g0771 | 268 | CDD | STKc_Aurora | 13 | 257 | - | - | |
| Lan1g0771 | 268 | Gene3D | Transferase(Phosphotransferase) domain 1 | 4 | 266 | - | - | |
| Lan1g0771 | 268 | SUPERFAMILY | Protein kinase-like (PK-like) | 6 | 261 | IPR011009 | - | |
| Lan1g0771 | 268 | ProSiteProfiles | Protein kinase domain profile. | 14 | 257 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lan1g0771 | Lan-Chr1 | 18051887 | 18055006 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lan1g0771 | 3 | 263 | CBL-interacting serine-threonine protein kinases | AT5G10930 | 37.681 | 4.66e-58 | 189 |
Transcription factors information
| Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
|---|---|---|---|---|---|---|---|
| PK | Aur | Lan1g0771 | Pkinase | 7e-70 | CL0016 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lan1g0771 | K08850 | - | gmx:100775802 | 473.011 |