Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0762 ATGAGTATGAATTCTAGCACGAGCCCGGGTGGTGACCGAAGGAACAATGCAGGTGGTGGTAGTGGTGTTAGTAGTGGTCCTTGTGGTGCATGCAAATTCCTGAGGAGAAAGTGTTTGTCAAGTTGTATCTTTGCGCCTTACTTCGATCCGGAGAATGGTGCAAACCACTTTGCATCCGTGCATAAGATTTTCGGAGCGAGCAATGTGTCCAAGCTTCTCGTGACCATTCCGATTCACATGAGGCCCGATGCGGTGCTTACCATTGTCTATGAAGCTCAGGCTAGGATGAGAGACCCTATCTATGGTTGTGTTTCTCATATCTTTACTCTTCAGCAACAGATTACTACTTTACAAAATGAACTCTCATACTTGCAAGCCCAACTTGCGGAACTACCCCAACCACCACCACCTCTGCAACAAGCAGCCATGGCTGCTGCCATGCCAGCCACATATGATTTGTCCACACTTTTTGACCCTATGGCTCAACAATCTCCAAGGAACATGATGCAGCAAAGGGCCATGGACCTGCGTTATCAGTATGTAGGTGGTAGCACATTGGCCGGTGGTAATGGTGGTGGCAGTGGTGTTGTTAGTTCTGTAGGCGGTGGTGGTGGTAATGGTAGTGGTGTCAGTGCTGCTGCTGGTGGTGGTAGTGGTGTTTTTAGTGGTGTCTGTGCTGGTGGTAGTGGTACCCGTGTTGTCAGTAATGTTGGTGTCGGTGGTGGTGGTGGTAGTGGTAATGGTGTTAGTAGTGGTAGTGGTACCCGTGTTGTTAGTAATGTCGGAGTCGGTGCTGGTGGTGGTGGTGGTGGTGGTGATCTTCATGCTTTGGCTCGTGAATTTCTCCGTAGAATTGGAGGAAATGCTTCTGGTGTTGCTGCTCCCAGTGTGGCTGGCACTAATGCTTCATTATCTCCCTCTAGTGCCAAGTGA 933 0.4952 MSMNSSTSPGGDRRNNAGGGSGVSSGPCGACKFLRRKCLSSCIFAPYFDPENGANHFASVHKIFGASNVSKLLVTIPIHMRPDAVLTIVYEAQARMRDPIYGCVSHIFTLQQQITTLQNELSYLQAQLAELPQPPPPLQQAAMAAAMPATYDLSTLFDPMAQQSPRNMMQQRAMDLRYQYVGGSTLAGGNGGGSGVVSSVGGGGGNGSGVSAAAGGGSGVFSGVCAGGSGTRVVSNVGVGGGGGSGNGVSSGSGTRVVSNVGVGAGGGGGGGDLHALAREFLRRIGGNASGVAAPSVAGTNASLSPSSAK* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0762 310 MobiDBLite consensus disorder prediction 1 25 - -
Lan1g0762 310 PANTHER LOB DOMAIN-CONTAINING PROTEIN 18 4 161 - -
Lan1g0762 310 MobiDBLite consensus disorder prediction 291 310 - -
Lan1g0762 310 ProSiteProfiles LOB domain profile. 26 128 IPR004883 -
Lan1g0762 310 MobiDBLite consensus disorder prediction 1 22 - -
Lan1g0762 310 Coils Coil 107 127 - -
Lan1g0762 310 PANTHER LOB DOMAIN CONTAINING PROTEIN 4 161 - -
Lan1g0762 310 MobiDBLite consensus disorder prediction 294 310 - -
Lan1g0762 310 Pfam Lateral organ boundaries (LOB) domain 27 125 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0762 Lan-Chr1 17804150 17807446 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g0762 30 214 AS2 family AT2G45420 49.275 1.92e-57 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lan1g0762 LOB 2.2e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0762 K21994 - cit:102621531 190.274