Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0740 ATGTCTGCTTCATCCACTTCCTTTTCACCGGACCAACAACACCACCTTTCTCCCTCCGACCAACTTTGTTATGTCCATTGCAACTTCTGTGACACTGTCCTCGCGGTGAGTGTTCCTTGCACAAGTTTGTTCAAGAATGTGACTGTGAGATGTGGTCATTGCACCAACCTTTTGTCTGTGAACATGCGTGGCCTACTCCTTCCTCCAACTAATCAGCTTCACATTGGACACAACTTCTTCACTCCTCAAAATCTTATGGAGGAGATTCGAAATGCACCTTCAACAAACATGATGATGAATCAGCTTCCTATTCCAAATGATTTGGTCATGAGCACCATGCGTGGAGGACCAGAAGAAATCCCTAAGCCTCCACCTGCTAATAGACCTCCCGAGAAGAGACAGAGAGTTCCATCTGCCTACAACCGCTTCATCAAGGATGAGATCCAACGTATAAAAGCTGGAAATCCTGATATAAGTCACAGAGAAGCCTTTAGTGCAGCTGCAAAGAATTGGGCCCACTTTCCACACATTCATTTCGGACTTATGCCTGATCATCAACCCGTGAAGAAAGCTAATATTCATCAGGAAGCAGAAGACATGCTTTTGAAAGATGGGTTTTTCTCACCTACAAATGTAGGTGTCACTCCCTACTAG 654 0.4495 MSASSTSFSPDQQHHLSPSDQLCYVHCNFCDTVLAVSVPCTSLFKNVTVRCGHCTNLLSVNMRGLLLPPTNQLHIGHNFFTPQNLMEEIRNAPSTNMMMNQLPIPNDLVMSTMRGGPEEIPKPPPANRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDHQPVKKANIHQEAEDMLLKDGFFSPTNVGVTPY* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0740 217 MobiDBLite consensus disorder prediction 114 136 - -
Lan1g0740 217 PANTHER PROTEIN YABBY 4 1 215 - -
Lan1g0740 217 Gene3D High mobility group box domain 121 198 IPR036910 -
Lan1g0740 217 PANTHER PROTEIN YABBY 6-RELATED 1 215 IPR006780 GO:0007275
Lan1g0740 217 SUPERFAMILY HMG-box 126 175 IPR036910 -
Lan1g0740 217 Pfam YABBY protein 18 181 IPR006780 GO:0007275
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0740 Lan-Chr1 17377285 17380818 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g0740 29 215 C2C2-YABBY Transcription Factor Family AT4G00180 62.201 4.91e-67 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Lan1g0740 YABBY 4.6e-73 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0740 K25796 - gmx:100794423 404.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0160 12 2101024 2104554 Lan1g0740 1 17377285 17380818 LSH