Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0728 ATGGACCCAACACAGCTTGTTGTGTTTACATCTCAGGACTTGATAGCATGTACCAATAATTTCAATGAGAGCAACCTCATTGGATTGACACAGCTTGGAAGATTCTTTAGAGGAAACATTGAAGGTCAACATGTATCATTGAAGATATTGGATGATGAAAAATTGGAATGCTTGAGTTCCAAAAACATTGATAAGTATTTGATTATCAAGGAGGAGGTTAAGTTTTGGATAAATCCAGTATTGAAAGGTAATCCCAACTTGGTGTCCTTAATTGGTTATTGTTGGGAGGAAGATGTAAAGGGTGTTGTGTATGATCTCAGTTCACTTGTTACTTTGCATACGATAATAATGAAAGATAGACTGAATTGGATTCAAAGAATCAATGTAATTTATGAACTTGCAATGCTCCTAAAATTCATTCATGACCAGGAGAAGCAAAACATGGCTTTAAATATAAGTGCATCTCATATACTTCTAGACAAGGATTATAAGCCAAAATTATTTGATTTGGTGCCTCTTAATGAAGTGAAAATGCTTAAGGAGCAATTAACAATGTCAACATGCTACATTGATCCTCATTTTTCTATGAGGGGTGGTGAATGGAATAGAAGCTGTGAAGTGTTTTCATTTGGCATTGTTTTGCTTGAATTATTGACAAAAAGGATTTCAGACATTGGGAAAACAGAAGATCATGCAAGCATAAACTTGAATAGTCTGCTACATATTTGGGCCAAGAATGAGTACAAACCAAATTGTTCTCTTGTTCACAAAAATCTTCAGGAAGATTGGAATTACTGTGCTATAGATGGTGTTGCAGTAACTCAATTGGCAATGCAATGCATAGAATTTTTTCCATCAAACCGTCCATCAATGAAGGATGTGATCCAGAGTTTAGAAAATCTTACAGTGTTACAACGTTTAGGTGATGCTAGACCAATAAAAAGGGAAAAGAATTTCATATCATCATGA 969 0.3478 MDPTQLVVFTSQDLIACTNNFNESNLIGLTQLGRFFRGNIEGQHVSLKILDDEKLECLSSKNIDKYLIIKEEVKFWINPVLKGNPNLVSLIGYCWEEDVKGVVYDLSSLVTLHTIIMKDRLNWIQRINVIYELAMLLKFIHDQEKQNMALNISASHILLDKDYKPKLFDLVPLNEVKMLKEQLTMSTCYIDPHFSMRGGEWNRSCEVFSFGIVLLELLTKRISDIGKTEDHASINLNSLLHIWAKNEYKPNCSLVHKNLQEDWNYCAIDGVAVTQLAMQCIEFFPSNRPSMKDVIQSLENLTVLQRLGDARPIKREKNFISS* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0728 322 ProSiteProfiles Protein kinase domain profile. 21 301 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan1g0728 322 PANTHER RECEPTOR-LIKE KINASE 3 306 - -
Lan1g0728 322 PANTHER OS01G0588500 PROTEIN-RELATED 3 306 - -
Lan1g0728 322 Pfam Protein kinase domain 41 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan1g0728 322 SMART serkin_6 21 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan1g0728 322 Gene3D Transferase(Phosphotransferase) domain 1 107 312 - -
Lan1g0728 322 Gene3D Phosphorylase Kinase; domain 1 1 106 - -
Lan1g0728 322 SUPERFAMILY Protein kinase-like (PK-like) 5 299 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0728 Lan-Chr1 17016981 17019797 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g0728 4 303 Receptor kinase-like Gene Family AT4G11530 24.679 3.65e-23 98.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lan1g0728 Pkinase 2.4e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0728 - - gmx:102662076 473.011