Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0724 ATGGACATTGTGCTTAGTTACTTGTTTTCTCTTGTAGTCCTTTATTCTGTATTCGTAAACCCTTGTTATGGTATCAATTTTAATTTGTTTAATTTGTCCAAAACTTTGAGTGAGGATCAATGGCAAACAGCAACAGTTACATGGTACGGACCTCCAGATGGTGCTGGATCCGATGGGGGTAATTGCGGATATGGTGAAACTGTGGAGACACCTCCACTCTCTAAAATGATATCAGCTGGAGGTCCATCCATTTTCCAAGGTGGCAGCGGCTGTGGTGCTTGTTATCAGGTAAAATGCACAGAAAATGCTGCATGCTCACAAGAGCCTGTGAATGTGGTCATAACTGATAATTGCCCTGGATGTACGGGATCAGCCTCTTTCGATCTGAGTGGCACGGCCTTTGGTGCAATGGCATCTCCAGGGAAAGCAGATCAACTTCGCAACGCTGGGAAACTAACAAACGCTCAATACAAAAGGGTTTCATGTAATTTTGGAAAATCTATAGCCTTTACCGTCGATAGTGGTTCTAGCCCATACTATTTTGCTATAGAGATTGAATATGAAAATGGAGATGGCAACATTGTAGCTGTTGAGTTGAAGCAAGGAACAGAATCAAACACATGGGTTCCAATGTTTCGTTCATGGGGTGCAAGATGGGCATTGAACCCAGGTAACCCGTTGAAACCTCCATTCTCTATTAAGCTCACTGAGTCTGGAGAGGGTAACAACAAAAAGAGCATTGTGGCTGACAAAGTTATTCCTAATGACTGGAAACCTGGCCAAGTTTATAGATCATTTGTCAATTTTTAG 810 0.4247 MDIVLSYLFSLVVLYSVFVNPCYGINFNLFNLSKTLSEDQWQTATVTWYGPPDGAGSDGGNCGYGETVETPPLSKMISAGGPSIFQGGSGCGACYQVKCTENAACSQEPVNVVITDNCPGCTGSASFDLSGTAFGAMASPGKADQLRNAGKLTNAQYKRVSCNFGKSIAFTVDSGSSPYYFAIEIEYENGDGNIVAVELKQGTESNTWVPMFRSWGARWALNPGNPLKPPFSIKLTESGEGNNKKSIVADKVIPNDWKPGQVYRSFVNF* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0724 269 PRINTS Major pollen allergen Lol pI signature 79 90 IPR005795 GO:0005576|GO:0019953
Lan1g0724 269 PRINTS Major pollen allergen Lol pI signature 99 109 IPR005795 GO:0005576|GO:0019953
Lan1g0724 269 PRINTS Major pollen allergen Lol pI signature 116 131 IPR005795 GO:0005576|GO:0019953
Lan1g0724 269 PRINTS Major pollen allergen Lol pI signature 138 153 IPR005795 GO:0005576|GO:0019953
Lan1g0724 269 PRINTS Major pollen allergen Lol pI signature 170 185 IPR005795 GO:0005576|GO:0019953
Lan1g0724 269 PRINTS Major pollen allergen Lol pI signature 186 201 IPR005795 GO:0005576|GO:0019953
Lan1g0724 269 PRINTS Major pollen allergen Lol pI signature 217 234 IPR005795 GO:0005576|GO:0019953
Lan1g0724 269 Gene3D - 164 269 IPR036749 -
Lan1g0724 269 PANTHER EXPANSIN-B3 3 269 - -
Lan1g0724 269 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 59 167 IPR007112 -
Lan1g0724 269 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 179 265 IPR007117 -
Lan1g0724 269 SUPERFAMILY PHL pollen allergen 166 265 IPR036749 -
Lan1g0724 269 Pfam Expansin C-terminal domain 168 254 IPR007117 -
Lan1g0724 269 PRINTS Expansin/Lol pI family signature 40 55 IPR007118 GO:0005576
Lan1g0724 269 PRINTS Expansin/Lol pI family signature 58 76 IPR007118 GO:0005576
Lan1g0724 269 PRINTS Expansin/Lol pI family signature 81 99 IPR007118 GO:0005576
Lan1g0724 269 PRINTS Expansin/Lol pI family signature 150 166 IPR007118 GO:0005576
Lan1g0724 269 PRINTS Expansin/Lol pI family signature 208 222 IPR007118 GO:0005576
Lan1g0724 269 Pfam Lytic transglycolase 78 141 IPR009009 -
Lan1g0724 269 Gene3D - 29 163 IPR036908 -
Lan1g0724 269 SUPERFAMILY Barwin-like endoglucanases 33 164 IPR036908 -
Lan1g0724 269 PANTHER EXPANSIN-LIKE PROTEIN B1 3 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0724 Lan-Chr1 16753462 16756177 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g0724 30 269 Expansin Gene Family AT1G65680 55.144 2.18e-90 267
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0724 - - gmx:100786475 360.147