Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0712 ATGGGAAATTACAAGTTCAAGTTATCAGATATGATACCCAATGCTTGGTTTTACAAGCTGAGAGACATAGGAAAAACAAGAAAGCAAAACACCACTCCCTCTAGGAAGAAAAAACAATCTCCATTAACCTCAACTACACAACAATCATCAAAACCAAACCAACCCCACCAATGCAACAACCCCAGAAAATCATACTACTTTACAAGAGAACTTGATCCAACAAGCAATAAAATCTACACTTCACCATCAAATACCCCAAAATTTTCACCTGACCCACCAAGAAAATCATCCAAACAAAGAAGGACCAAGAAAAGAACAATTACAAAGAGTTATTCACCAAAAGTTGTTAACTCCTCTGTCTCTTCTGGTTGTAATTTCCACACTACACTTGAATCTGTTTGGACTAATAAACTTGATTCTCCTCCACATGAGTACTCCTACTCTTCTTCTCAATTTGATAGCTCTACTGAATCTGAATTCCCAGACCCAGAATTCAGAACAGACCGTGTTCTTCTTCCCGTTAACACTACAAAAAATTTGTCATATACCTACAGACACAAACAAGACAATTACAACAGCAGCAGCAACAACGAGGATATCGTTATCGATGTGGATAAGAATTCTCTTGCAAAAAGAAAAGATGGGTATGAATTTGATTCATTCTCAGAGGTTGAGTTGCCTCCAATTATAACCAAACCAGTTATAAATGATGATGTTTCTCAAAAAGAAACAAAACCCAGAGAACAACAACACAACAAGAAAGGGTCTATGAAGGTTAAAATAGTGAAGGAAAACACATCAACAATCAAAGAACAGAGGAATTCCCCTGTTAGGAGATTCTCTATGAGTTCTTCAAAGGTGAAAGTTCATGTCAATTCACCAAGAATTGAAAGAAGGAAGGTCCATTCACATGGAAGGAAAATCGCACTGAGTTCGAGCTCCCGGAGGAGCCTTTCGGATAGCTTTGCAATTGTGAAGTCATCATTTAATCCTCAAAAGGATTTCAGAGAATCAATGATGGAGATGATTGTGGAGAACAACCTAAGAGGTTCAAAGGACTTGGAAGATCTTCTTGCTTGTTACCTTTCTCTTAATTCAGATGAGTATCATGACATTATTATCAAAGTCTTCAAGCAAATTTGGTTTGATTTCACAGAAAAAAGGTAG 1167 0.371 MGNYKFKLSDMIPNAWFYKLRDIGKTRKQNTTPSRKKKQSPLTSTTQQSSKPNQPHQCNNPRKSYYFTRELDPTSNKIYTSPSNTPKFSPDPPRKSSKQRRTKKRTITKSYSPKVVNSSVSSGCNFHTTLESVWTNKLDSPPHEYSYSSSQFDSSTESEFPDPEFRTDRVLLPVNTTKNLSYTYRHKQDNYNSSSNNEDIVIDVDKNSLAKRKDGYEFDSFSEVELPPIITKPVINDDVSQKETKPREQQHNKKGSMKVKIVKENTSTIKEQRNSPVRRFSMSSSKVKVHVNSPRIERRKVHSHGRKIALSSSSRRSLSDSFAIVKSSFNPQKDFRESMMEMIVENNLRGSKDLEDLLACYLSLNSDEYHDIIIKVFKQIWFDFTEKR* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0712 388 Pfam Transcriptional repressor, ovate 328 383 IPR006458 -
Lan1g0712 388 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 323 384 IPR006458 -
Lan1g0712 388 Pfam DNA-binding domain 1 40 IPR025830 GO:0003677
Lan1g0712 388 MobiDBLite consensus disorder prediction 27 62 - -
Lan1g0712 388 MobiDBLite consensus disorder prediction 74 114 - -
Lan1g0712 388 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 3 386 IPR038933 GO:0045892
Lan1g0712 388 MobiDBLite consensus disorder prediction 35 62 - -
Lan1g0712 388 ProSiteProfiles OVATE domain profile. 324 383 IPR006458 -
Lan1g0712 388 PANTHER OVATE TRANSCRIPTIONAL REPRESSOR 3 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0712 Lan-Chr1 16095228 16096646 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Lan1g0712 Ovate 3.4e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0712 - - aprc:113863721 372.089
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0182 12 2825574 2827229 Lan1g0712 1 16095228 16096646 LSH
Lan13g1194 13 17563217 17564789 Lan1g0712 1 16095228 16096646 PCT
Lan1g0712 1 16095228 16096646 Lan13g1194 13 17563217 17564789 PCT