Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0664 ATGAGCGATTCTGCATACAGAGTTGAAACCACTTCACGCCTTGCTCAATGGAAAATCGAAAACTTGTCTTCTTGTACTTACCGCAAATCCGATCCTTTCAAAATCGGAAAATGGAATTGGCATTTGTCTGTGGAGAAGAATAGGGTTTTGTATGTTAAATTATACCCAGAAATATCAAATTTAACAAGAGACAATCCTCCTATTGCATCTTTCATCATTCGGGTGGTTAGTTCTGTTGGAGATCGTAAGGCCTTCGCACATCCAGAAATAAAGGAAAAGTTACTAAAGAACAACGAGGATTTTGTTTGGGCAGTTGAGGTTCCTCTAACTGGAAAATTCATTATTGAAGTTGAGTTCCTTGATTTGAAGACCACATCCCCCAACGGTGAAGAACCTTACTCCATCTTTGCTGATGGATTTACTCAGAAAAGATTAAATGCAAAAGCCCTCGAGTCTCTTGGTAGAATGCTAACAGAAGGAATCCACACAGACATCACGATCAATGCGTCGGATGGAAGCATAGGAGCTCATCGAGCTGTTCTTGCAGCCCGCTCGCCTGTCTTTCGCAGCATGTTCTCACATAATCTTCAGGAAAAAGAGCTGTCTACCATAAACATCCCAGACATGTCAATTGAATCTTGTCAAGCTTTTCTCAACTATCTTTATGGGATCATCAAACATGAAAAATTTCTTATGCATAGGCTTGCCCTTCTACATGCAGCTGACAAGTATGACATATCTGACTTGAGAGACACATGCCACGAGAGTCTTCTGGATGATATTGATGCAACAAATGTACTTGAGAGGCTCCAAAATGCATCTCTATATCGATTAATGAAACTGAAGATGAGCTGTATTCATTATCTTGTGAAGTTTGGAAAAATATTTGACATTCGGGATGATTTCAATACCTTCCTGCAAAATGCAGACAGGGATCTGATTGCTGAAGTCTTCCATGAAGTTCTTGTTGCGTGGAAAGGATTCTGA 987 0.4012 MSDSAYRVETTSRLAQWKIENLSSCTYRKSDPFKIGKWNWHLSVEKNRVLYVKLYPEISNLTRDNPPIASFIIRVVSSVGDRKAFAHPEIKEKLLKNNEDFVWAVEVPLTGKFIIEVEFLDLKTTSPNGEEPYSIFADGFTQKRLNAKALESLGRMLTEGIHTDITINASDGSIGAHRAVLAARSPVFRSMFSHNLQEKELSTINIPDMSIESCQAFLNYLYGIIKHEKFLMHRLALLHAADKYDISDLRDTCHESLLDDIDATNVLERLQNASLYRLMKLKMSCIHYLVKFGKIFDIRDDFNTFLQNADRDLIAEVFHEVLVAWKGF* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0664 328 PANTHER OS08G0495500 PROTEIN 1 328 - -
Lan1g0664 328 CDD MATH 17 119 IPR002083 GO:0005515
Lan1g0664 328 SUPERFAMILY TRAF domain-like 13 86 - -
Lan1g0664 328 CDD BTB_POZ_ZBTB_KLHL-like 162 244 - -
Lan1g0664 328 Gene3D Potassium Channel Kv1.1; Chain A 141 291 IPR011333 -
Lan1g0664 328 ProSiteProfiles BTB domain profile. 163 222 IPR000210 GO:0005515
Lan1g0664 328 SUPERFAMILY POZ domain 146 259 IPR011333 -
Lan1g0664 328 SMART BTB_4 163 261 IPR000210 GO:0005515
Lan1g0664 328 PANTHER OS08G0495500 PROTEIN-RELATED 1 328 IPR044714 -
Lan1g0664 328 Pfam BTB/POZ domain 156 258 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0664 Lan-Chr1 13070535 13073898 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Lan1g0664 BTB 1.2e-22 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0664 K10523 - gmx:100790186 598.586