Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0652 ATGAATTCTTCACTAAACCAAGAACCATGGCTTGATCTTGAGGGTGGCAGCAACCTCAAGGGATTAAGCAGAGAGATGAGACATGGAAGAAAAACAGCACATAACATGTCATCCTCCTCTTTGCGCAAGAAATCTGACCTCACTCTTGTGTCCAAGGTTAACTCTAGGTTCCTTAGAAATTTGTTGGTTAACCTTCAAGAGGTTATTCTTGGAACCAAGCTTTCTGTTCTGTTCCTAGCTATTCCACTTGCGATCATTGCTGAGTGCTATGGCTTTGCAAGACCTTGGGTTTTTGCCTTGAGCTTACTTGGGCTTACACCACTTGCTGAACGAGTCAGCTTCTTGACAGAACAAGTTGCTTGTTACACAGGTCCCACAGTTGGAGGACTTCTGAACGCTACATGTGGGAATATCACTGAACTTGTCATAGCAATATTTGCCCTTAGGGAGAATAAAATCGCTGTGGTGAAATATTCTCTTCTGGGTTCTATCCTTTCAAACCTTCTGCTTGTTCTCGGTACCTCTCTATTCTGCGGCGGCATTGTGAACCTCAGACAGGAACAAAAATTTGACAGAAGACAGGGAGATGTGAACTCGCTTATGCTGCTTCTGGGATTGTTGTGCTACTTTCTACCTATGCTATTTAGATATGGTGCTGCAGCCCCCACTGCAGACCCAGCTCTAGAGTTGTCAAGAGCTGCAAGTATTGTGATGCTGATTGCATATTTTGCTTACCTTATCTTCCAACTGTGGACTCACCGGCAATTATTTGAAGCCCAAGTTGATGATGATCAGGAGGGTGACAATGCATCAGAAGAAGCAGTGATAGGATTTTGGAGTGGGTTTGCTTGGCTGGTTGGGATGACTGTATTAATTGCTTTGTTGTCTGAATATGTGGTGGAAACAATTGAGGATGCATCAGATTCATGGGGTCTGTCTGTCAGCTTCATCAGCATAATCTTGCTACCAATAGTCGGCAATGCAGCTGAACATGCGGGAGCAATCATATTTGCTTTCAAGAACAAGCTGGACATAACTTTAGGTGTTGCTCTGGGTTCTGCTACTCAAATTGGCATGTTTGTGGTTCCCCTTTGTACAATTGTTGCTTGGATTATGGGCATTAAAATGGACCTCAACTTCAACCTCCTAGAGACAGGTTCTCTTACTTTAGCAATAATAACCACAGCCTTCACATTACAGGATGGAACTTCTCACTACATGAAAGGCCTTATTCTCCTGCTCTGCTACGTCGTCATTGGGGCCTGCTTTTTTGTCCAAAGAACACCTTCGAACCAAGCTGCTGCCACTAACATGATGCTTAAATTAGCAACTGATACAGTTTCAAGTGCTTAA 1353 0.4361 MNSSLNQEPWLDLEGGSNLKGLSREMRHGRKTAHNMSSSSLRKKSDLTLVSKVNSRFLRNLLVNLQEVILGTKLSVLFLAIPLAIIAECYGFARPWVFALSLLGLTPLAERVSFLTEQVACYTGPTVGGLLNATCGNITELVIAIFALRENKIAVVKYSLLGSILSNLLLVLGTSLFCGGIVNLRQEQKFDRRQGDVNSLMLLLGLLCYFLPMLFRYGAAAPTADPALELSRAASIVMLIAYFAYLIFQLWTHRQLFEAQVDDDQEGDNASEEAVIGFWSGFAWLVGMTVLIALLSEYVVETIEDASDSWGLSVSFISIILLPIVGNAAEHAGAIIFAFKNKLDITLGVALGSATQIGMFVVPLCTIVAWIMGIKMDLNFNLLETGSLTLAIITTAFTLQDGTSHYMKGLILLLCYVVIGACFFVQRTPSNQAAATNMMLKLATDTVSSA* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0652 450 PANTHER VACUOLAR CATION/PROTON EXCHANGER 3 3 436 - -
Lan1g0652 450 TIGRFAM cax: calcium/proton exchanger 78 424 IPR004798 GO:0006816|GO:0015369
Lan1g0652 450 Pfam Sodium/calcium exchanger protein 281 419 IPR004837 GO:0016021|GO:0055085
Lan1g0652 450 Pfam Sodium/calcium exchanger protein 96 251 IPR004837 GO:0016021|GO:0055085
Lan1g0652 450 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 3 436 IPR004713 GO:0006812|GO:0008324|GO:0016021
Lan1g0652 450 Gene3D - 125 274 IPR044880 -
Lan1g0652 450 Gene3D - 275 423 IPR044880 -
Lan1g0652 450 TIGRFAM caca2: calcium/proton exchanger 60 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0652 Lan-Chr1 12499598 12503931 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g0652 8 432 Antiporters AT2G38170 70.737 0.0 590
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0652 K07300 - gmx:100782052 663.685