Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0630 ATGGACAAACCCCATAATTTTCTTCATAGTCTTATAAATCACTTCAAATTTGGTTCCACTGGAGTGTTGTGTTTATCAGAACAAAACAATGAAGCTGACTTACAAAGAATGGCTGCACAGGAACAAAAGATATTTTCCTATGAAACCTTGGTTGCTGCCACCAAGAATTTCAATCCAATTCATAAGCTAGGCGAGGGAGGTTTTGGACCTGTGTACAAGGGGAGACTGAATGATGGGAGAGAGATTGCAGTGAAGAAGTTATCACAGACCTCAAATCAAGGGAAGAAAGAGTTCAAGAATGAGGCGAAGTTGTTGGCTCGTGTGCAGCATCGGAATGTGGTGAATCTGCTGGGTTATTGCGTTCATGGCAAAGAAAATATACTTGTTTATGAGTATGTGCCTCATGAGAGCCTTGACAAGCTTCTATTCAAATCCGAGAGGAAAGAGGAACTTGATTGGAAACGTAGGTATGGAATAATCACAGGGATGGCAAAGGGGTTGCTTTATCTCCATGAGGACTCACATGATTGCATCATCCATCGAGACATAAAGGCAAGTAACATCTTACTTGATGACAAGTGGTCACCTAAGATTGCTGACTTTGGCATGGCTCGTCTCTTCCCGGAAGATCAAAGCCAAGTCAATACACGTGTTGCTGGAACCAATGGATATATGGCTCCGGAGTATGTGATGCACGGGAATCTGTCTGTGAAGGCAGACGTGTTTAGCTATGGAGTCGTGGTGTTGGAGTTGATCACTGGGCAACGAAACTCAGCGTTTAACTTGGATGTGGATGCGCAGAGTCTACTTGATTGGGCATACAAGCAGTACAAGAAAGGAAAGAGCTTAGACATTGTAGATTCCACATTAGCATCTTCAATGGAACCTGAACAAGTAACAATGTGCATTCAGCTGGGTCTGCTATGCACCCAAGGCGATCCACAGTTACGCCCGAACATGCGGCGCGTGGTGGTGATGCTGTCTAAGAAACCTGGCCACATGGATGAACCAACAAGGCCAGGGATGCCTGGTTCCAGATATAGAAGACACCGCAGACAGTCTGCAATGTCTTCGATAGCCGATACCTCGGTTACTTCTGATTCAAGCAACAATTATACCACCACTGTTACTACTACTGCGACAAGAACAAACTCTGCAACAGGAAGAAACTCAGCTACTGATACTTTAGAAATAGATCGTAGAGGGAAACGTCCAATGTCGGGTTAG 1227 0.445 MDKPHNFLHSLINHFKFGSTGVLCLSEQNNEADLQRMAAQEQKIFSYETLVAATKNFNPIHKLGEGGFGPVYKGRLNDGREIAVKKLSQTSNQGKKEFKNEAKLLARVQHRNVVNLLGYCVHGKENILVYEYVPHESLDKLLFKSERKEELDWKRRYGIITGMAKGLLYLHEDSHDCIIHRDIKASNILLDDKWSPKIADFGMARLFPEDQSQVNTRVAGTNGYMAPEYVMHGNLSVKADVFSYGVVVLELITGQRNSAFNLDVDAQSLLDWAYKQYKKGKSLDIVDSTLASSMEPEQVTMCIQLGLLCTQGDPQLRPNMRRVVVMLSKKPGHMDEPTRPGMPGSRYRRHRRQSAMSSIADTSVTSDSSNNYTTTVTTTATRTNSATGRNSATDTLEIDRRGKRPMSG* 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0630 408 ProSiteProfiles Protein kinase domain profile. 57 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan1g0630 408 MobiDBLite consensus disorder prediction 394 408 - -
Lan1g0630 408 Pfam Protein tyrosine and serine/threonine kinase 61 326 IPR001245 GO:0004672|GO:0006468
Lan1g0630 408 MobiDBLite consensus disorder prediction 356 393 - -
Lan1g0630 408 SMART serkin_6 57 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan1g0630 408 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 3 380 - -
Lan1g0630 408 SUPERFAMILY Protein kinase-like (PK-like) 42 358 IPR011009 -
Lan1g0630 408 Gene3D Phosphorylase Kinase; domain 1 19 132 - -
Lan1g0630 408 MobiDBLite consensus disorder prediction 331 408 - -
Lan1g0630 408 PANTHER RECEPTOR-LIKE KINASE 3 380 - -
Lan1g0630 408 CDD STKc_IRAK 63 329 - -
Lan1g0630 408 ProSitePatterns Serine/Threonine protein kinases active-site signature. 178 190 IPR008271 GO:0004672|GO:0006468
Lan1g0630 408 Gene3D Transferase(Phosphotransferase) domain 1 133 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0630 Lan-Chr1 11092886 11101907 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g0630 45 365 Receptor kinase-like Gene Family AT4G11530 49.699 7.23e-113 343
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lan1g0630 PK_Tyr_Ser-Thr 2.8e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0630 - - gmx:100795769 627.091