Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0622 ATGGACGAAGACTTCGAGTTTCCAGCAGCAAACAACATTGAGGATGAGGAGATGGAGATTCCCGAAGATGAAGACACAGTGAGTTCGATGATGAAGGTTGGTGAAGAGAAGGGGATTGGGAATAATGGTTTGAAGAAGAAGCTGGTTAAGGAAGGTGAAGGATGGGATAACCCTGGTTCTGGTGATGAAGTTGAAGTGCATTATACGGGAACGTTGTTGGATGGAACTCAATTTGATTCTAGCCGTAGCAGGGATACTCCTTTCAAGTTCAAGCTTGGACAAGGACAAGTAATCAAGGGATGGGATGAAGGTATCAAAACCATGAAGAAGGGTGAAAATGCCATTTTCACAATACCCCCAGAATTGGCTTATGGAGAGTCTGGCTCTCCTCCCACTATTCCTCCAAATGCAACTCTACAGTTTGATGTGGAGTTGCTGTCTTGGACAAGTGAGAAGGATATATGCAAGGATGGAGGAATACTCAAGAAGATAGTCACTGAAGGGGAGAAATGGGATAATCCTAAGGACATGGATGAAGTGTTTGTTAAGTATGTGGCTCGCCTTGAAGATGGGACCGTCATTTCAAAATCTGATGGGGTGGAGTTTACAGTAGAACAGGGTTATTTCTGTTCCGCAATGGCCAAGGCTGTGAAAACAATGAAGAAGGGAGAGAAAGCCTTCTTGACTGTGAAACCGCAATATGCATTTGGTGAGAATGGAAGGCCAGCATCAGGAGATGAAGGTGCTGTACCTCCTAGTGCTTCTCTCCAAATAGAGCTAGAGTTAGTCTCATGGAAGACCGTATCTGATATTACCAAGGATAAGAAGGTTCTCAAGAAGACTTTGAAGGAGGGAGAGGGCTATGAACGACCCAATGATGGAGCTGTGGCTCAAGTGAAACTCATTGGCAAGTTGACAGATGGAACTATTTTCCTTAAGAAGGGTTATGATGATGAACAGCCACTTGAGTTCAAAATTGATGAAGAGCAAGTAATTGATGGACTTGATAGAGCTGTGAAGAACATGAAGAAAGGGGAAATTGCATTGGTGATCATACAACCGGAATATGCTTTTGGTCCATCTGGGTCACCTCAAGAATTGGCAACTGTTCCTCCCAATGCCACTGTGTACTATGAAGTTGAGTTGCTTTCCTTTGTAAAGGAAAAGGAATCGTGGGATTTGAACACACAAGAGAAGATTGAGGCAGCTGGGAAGAAAAAGGAAGAAGGGAATGCATTGTTCAAGTCTGGTAAATATGAAAGAGCATCAAAGAGATATGAAAAGGCCATAAAGCTTATTGAGTATGATTCCTCCTTCAGCGATGAGGAGAAACAAAAGAGCAAGGTGTTGAAAATCACATGCAACCTCAACAACGCAGCATGTAAGTTGAAACTAAAGAACTACAAAGATGCAGAGAAGTTGTGTTCTAAGGTATTGGAACTTGATAGTAGGAATGTAAAAGCACTATACCGAAGGGCGCAGGCATATATTCACCTAGTGGACTTGGATCTGGCTGAGATGGACATTAAGAAAGCCCTGGAGATTGAGCCAGATAACAGGGATGTGAAGATGGAGTACAAGATTTTGAAAGAGAAAGTGAGAGAATACAACAAGAAGGATGCACAATTTTATGGCAGCATATTTGCCAAAATGACCAAAGTAGAACAACCAAAAGCTGCAGCAACTAAGCAGGAGTCTGTGCCAATGACCATTGATAGTAAAGCTTAA 1728 0.4259 MDEDFEFPAANNIEDEEMEIPEDEDTVSSMMKVGEEKGIGNNGLKKKLVKEGEGWDNPGSGDEVEVHYTGTLLDGTQFDSSRSRDTPFKFKLGQGQVIKGWDEGIKTMKKGENAIFTIPPELAYGESGSPPTIPPNATLQFDVELLSWTSEKDICKDGGILKKIVTEGEKWDNPKDMDEVFVKYVARLEDGTVISKSDGVEFTVEQGYFCSAMAKAVKTMKKGEKAFLTVKPQYAFGENGRPASGDEGAVPPSASLQIELELVSWKTVSDITKDKKVLKKTLKEGEGYERPNDGAVAQVKLIGKLTDGTIFLKKGYDDEQPLEFKIDEEQVIDGLDRAVKNMKKGEIALVIIQPEYAFGPSGSPQELATVPPNATVYYEVELLSFVKEKESWDLNTQEKIEAAGKKKEEGNALFKSGKYERASKRYEKAIKLIEYDSSFSDEEKQKSKVLKITCNLNNAACKLKLKNYKDAEKLCSKVLELDSRNVKALYRRAQAYIHLVDLDLAEMDIKKALEIEPDNRDVKMEYKILKEKVREYNKKDAQFYGSIFAKMTKVEQPKAAATKQESVPMTIDSKA* 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0622 575 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 20 273 - -
Lan1g0622 575 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 278 386 - -
Lan1g0622 575 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 386 561 - -
Lan1g0622 575 SUPERFAMILY FKBP-like 38 154 - -
Lan1g0622 575 SMART tpr_5 486 519 IPR019734 GO:0005515
Lan1g0622 575 SMART tpr_5 452 485 IPR019734 GO:0005515
Lan1g0622 575 SMART tpr_5 403 436 IPR019734 GO:0005515
Lan1g0622 575 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 61 149 IPR001179 GO:0003755
Lan1g0622 575 PANTHER PEPTIDYLPROLYL ISOMERASE 386 561 - -
Lan1g0622 575 PANTHER PEPTIDYLPROLYL ISOMERASE 278 386 - -
Lan1g0622 575 PANTHER PEPTIDYLPROLYL ISOMERASE 20 273 - -
Lan1g0622 575 ProSiteProfiles TPR repeat profile. 486 519 IPR019734 GO:0005515
Lan1g0622 575 Gene3D - 8 151 IPR046357 GO:0003755
Lan1g0622 575 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 177 266 IPR001179 GO:0003755
Lan1g0622 575 ProSiteProfiles TPR repeat profile. 403 436 IPR019734 GO:0005515
Lan1g0622 575 SUPERFAMILY FKBP-like 268 403 - -
Lan1g0622 575 Pfam Tetratricopeptide repeat 463 518 - -
Lan1g0622 575 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 294 386 IPR001179 GO:0003755
Lan1g0622 575 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 288 383 IPR001179 GO:0003755
Lan1g0622 575 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 173 263 IPR001179 GO:0003755
Lan1g0622 575 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 58 146 IPR001179 GO:0003755
Lan1g0622 575 Gene3D Tetratricopeptide repeat domain 389 546 IPR011990 GO:0005515
Lan1g0622 575 Gene3D - 267 388 IPR046357 GO:0003755
Lan1g0622 575 SUPERFAMILY TPR-like 392 550 IPR011990 GO:0005515
Lan1g0622 575 SUPERFAMILY FKBP-like 153 269 - -
Lan1g0622 575 Coils Coil 519 539 - -
Lan1g0622 575 Gene3D - 152 266 IPR046357 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0622 Lan-Chr1 10307384 10311319 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g0622 23 575 Calmodulin-binding Proteins AT5G48570 71.942 0.0 824
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0622 K09571 - gmx:100819747 969.148