Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0596 ATGCATTGTTATGGCTTAACCATTCCCCAAACCCACACACTCTTCTACAACCATATCCCCATTTCTCCAACCACAATCTCTCTCCAACCCATCATCACATACCCCACCACAATCTCATTTTCCTCACTCAGAACAAACGCCACCCTCAACGGTGGTCACGTGGTTTCTACGGAGGTTTCTCACCGGAGCTTCTATGAACTTCTGGGTATACCATTATCGGGTTCATTGATGGAGATCAAACAAGCGTATAAGCAATTGGCTCGAAAGTATCACCCAGATGTGTCACCACCGGATCGGGTTGAGGAATATACGAAAAGGTTTATTCTTGTTCAGGAGGCTTATGAGACCCTTTCTGATCCTAGACTCAGAGATATGTATGATAGAGATATGGCTAAGGGTATTCATCTTGCGTTCAATTCTCGTACACGTTATCACAATGATGATCATGAGATTGAACAAAAAGCTAATTGGAAAAGTCGTTGGCAGTCTCAATTGTCCGAGCTGAAGAGAAGAAATGAGAGCAAGAATGCTAGAGAGAATACCTCATGGGCAGCTCGAATGCGTCAGCAGAGAGATCAATCATCAACCAAATTATGA 597 0.4355 MHCYGLTIPQTHTLFYNHIPISPTTISLQPIITYPTTISFSSLRTNATLNGGHVVSTEVSHRSFYELLGIPLSGSLMEIKQAYKQLARKYHPDVSPPDRVEEYTKRFILVQEAYETLSDPRLRDMYDRDMAKGIHLAFNSRTRYHNDDHEIEQKANWKSRWQSQLSELKRRNESKNARENTSWAARMRQQRDQSSTKL* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0596 198 SUPERFAMILY Chaperone J-domain 59 133 IPR036869 -
Lan1g0596 198 ProSitePatterns Nt-dnaJ domain signature. 107 126 IPR018253 -
Lan1g0596 198 Coils Coil 158 178 - -
Lan1g0596 198 Gene3D DnaJ domain 51 195 IPR036869 -
Lan1g0596 198 CDD DnaJ 64 119 IPR001623 -
Lan1g0596 198 PRINTS DnaJ domain signature 65 83 IPR001623 -
Lan1g0596 198 PRINTS DnaJ domain signature 83 98 IPR001623 -
Lan1g0596 198 PRINTS DnaJ domain signature 102 122 IPR001623 -
Lan1g0596 198 MobiDBLite consensus disorder prediction 178 198 - -
Lan1g0596 198 SMART dnaj_3 62 122 IPR001623 -
Lan1g0596 198 Pfam DnaJ domain 64 127 IPR001623 -
Lan1g0596 198 ProSiteProfiles dnaJ domain profile. 63 130 IPR001623 -
Lan1g0596 198 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 34 195 - -
Lan1g0596 198 PANTHER CHAPERONE PROTEIN DNAJ 20, CHLOROPLASTIC 34 195 - -
Lan1g0596 198 MobiDBLite consensus disorder prediction 168 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0596 Lan-Chr1 8860494 8863104 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g0596 56 127 C2H2 Transcription Factor Family AT1G74250 38.667 5.01e-06 44.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0596 - - lang:109341995 308.916