Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0570 ATGGCTACTATTGTATCTCACTCTCTTCTCCATTCTCTCTTCACAGTCTCTTCCTCTTCCATTTCTTCATCATCTTCTTCTTCCTTCTTTGGTGGGACCCACCTTTATTCTCACGCCACACTCCTTTCTACATTTTCTTCACCTTCTTCTATCTTTTCTCCATCAAAAAACTCCAAATTCAAAACCTTTCTTGTTTCTGCTTCTTCTTCCAGAGATTACTATTCTACCCTCGGAATCCCCAAATCTGCATCTGTTAAAGAAATCAAAGCCGCTTATCGAAAATTAGCTCGTCAGTATCATCCTGATGTGAACAAGGAACCTGGAGCAACTGAAAAGTTCAAAGAAGTTAGTGCTGCTTATGAGGTGCTATCAGATGATAAAAAAAGAGCTTTGTATGATAAATATGGTGAGGATGGAGTTAAGAGTACTATCAGAGGAGGACCAAGTACCTATACGACTGATCCATTTGATTTATTTGAGAGATTTTTTCGGTCAAGAGTGGATGACTTCCCTGGCATGGATCCAACCAATTTTGGAACACGTCAACGCAGTAGTTCCACGAAGGGTCAAGACATCCGTTATGATATCTCCTTGGAGTTTTCTGAGGCAATTTTTGGAGCAGAGAAAGAATTTGAGCTTACCCATATGGAAACCTGTGAAGTTTGTAACGGTACTGGAGGCAAGACAGGTTCCAAGAGAAGAGTATGCTCAACTTGTGGTGGGAGGGGTCAGGTGATGAGGACTGAACAAACACCTTTTGGAATGTTCTCGCGGGTTTCAGTTTGTCCAAACTGTGGAGGGGATGGTGAAGTCATATCTGAATATTGCCATAAGTGCAGAGGCGAAGAACGCATACGGGTTAAGAAAAATATCAAAGTTAAAATCCCCCCTGGGGTTAACTCTGGCAGTATTCTGCGTGTTGCTGGGGAGGGTGATGCCGGACCAAGAGGGGCCCCTCGAGGTGATCTTTATGTTTATCTTGATGTAGAAGAGATACCAGGAATTCAAAGAGATGACATTAATCTCTGCTCAACTATATCGATCGATTATCTAGATGCCATACTAGGGACAGTTGTCAAGGTGAAGACAGTTGAAGGCACTTCTGAACTAGAAATACCTCATGGTACCCAACATGGAGATGTCCTTGTCCTTGCAAGAAAAGGTATCCCGAAATTAAAAAAACCATCGACACGTGGTGACCACTTATTTACGGTTAAAATCACAATACCAGAACGTATCAGTATAACGGAACATCAGTTGCTTGAAGAACTTTCATTGCTAGGCAACAAAACGAGCAGCTGTTCAAAATCTCGTCCTCAAACTCGTGTTCCTAAAGGAAGTACTGAAGCAACAGTTGCAGAACAAACTGAACAATCAGAAGACCAACATGTCCTATGGAAAAAAGTAAAGAACACTGCTCGGTCTATGGGAAATGGAGCTTTGAAGTGGCTGAAGGACAAGATTTAG 1467 0.4206 MATIVSHSLLHSLFTVSSSSISSSSSSSFFGGTHLYSHATLLSTFSSPSSIFSPSKNSKFKTFLVSASSSRDYYSTLGIPKSASVKEIKAAYRKLARQYHPDVNKEPGATEKFKEVSAAYEVLSDDKKRALYDKYGEDGVKSTIRGGPSTYTTDPFDLFERFFRSRVDDFPGMDPTNFGTRQRSSSTKGQDIRYDISLEFSEAIFGAEKEFELTHMETCEVCNGTGGKTGSKRRVCSTCGGRGQVMRTEQTPFGMFSRVSVCPNCGGDGEVISEYCHKCRGEERIRVKKNIKVKIPPGVNSGSILRVAGEGDAGPRGAPRGDLYVYLDVEEIPGIQRDDINLCSTISIDYLDAILGTVVKVKTVEGTSELEIPHGTQHGDVLVLARKGIPKLKKPSTRGDHLFTVKITIPERISITEHQLLEELSLLGNKTSSCSKSRPQTRVPKGSTEATVAEQTEQSEDQHVLWKKVKNTARSMGNGALKWLKDKI* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0570 488 Pfam DnaJ C terminal domain 192 410 IPR002939 -
Lan1g0570 488 TIGRFAM DnaJ_bact: chaperone protein DnaJ 72 425 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Lan1g0570 488 CDD DnaJ 72 125 IPR001623 -
Lan1g0570 488 PRINTS DnaJ domain signature 74 92 IPR001623 -
Lan1g0570 488 PRINTS DnaJ domain signature 92 107 IPR001623 -
Lan1g0570 488 PRINTS DnaJ domain signature 108 128 IPR001623 -
Lan1g0570 488 PRINTS DnaJ domain signature 128 147 IPR001623 -
Lan1g0570 488 CDD DnaJ_zf 219 282 IPR001305 GO:0031072|GO:0051082
Lan1g0570 488 Pfam DnaJ domain 72 133 IPR001623 -
Lan1g0570 488 ProSiteProfiles Zinc finger CR-type profile. 206 288 IPR001305 GO:0031072|GO:0051082
Lan1g0570 488 PANTHER MOLECULAR CHAPERONE HSP40/DNAJ FAMILY PROTEIN 59 440 - -
Lan1g0570 488 CDD DnaJ_C 190 413 - -
Lan1g0570 488 ProSitePatterns Nt-dnaJ domain signature. 113 132 IPR018253 -
Lan1g0570 488 SUPERFAMILY HSP40/DnaJ peptide-binding domain 336 421 IPR008971 GO:0006457|GO:0051082
Lan1g0570 488 ProSiteProfiles dnaJ domain profile. 72 136 IPR001623 -
Lan1g0570 488 Gene3D - 189 325 - -
Lan1g0570 488 Gene3D DnaJ domain 69 171 IPR036869 -
Lan1g0570 488 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 206 285 IPR036410 -
Lan1g0570 488 SMART dnaj_3 71 128 IPR001623 -
Lan1g0570 488 Gene3D - 219 283 - -
Lan1g0570 488 Pfam DnaJ central domain 219 282 IPR001305 GO:0031072|GO:0051082
Lan1g0570 488 Hamap Chaperone protein DnaJ [dnaJ]. 69 472 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Lan1g0570 488 Gene3D - 335 426 - -
Lan1g0570 488 SUPERFAMILY HSP40/DnaJ peptide-binding domain 190 330 IPR008971 GO:0006457|GO:0051082
Lan1g0570 488 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 59 440 - -
Lan1g0570 488 MobiDBLite consensus disorder prediction 431 459 - -
Lan1g0570 488 SUPERFAMILY Chaperone J-domain 67 170 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0570 Lan-Chr1 7725382 7731034 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g0570 66 135 C2H2 Transcription Factor Family AT1G74250 48.684 7.88e-11 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0570 K03686 - gmx:100798567 643.269