Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0557 ATGGCTTCTTCACCTAGTGGAGGCTATTCAGGTGGTTCAAGCTCTCTTCAGAATTCTAACTCTGGTTCTGAGAGAGATCACCAACAGCACCATGTCATGGATCAAAAGAAGAGGAAGAGAATGTTGTCCAATAGAGAATCGGCTCGAAGATCGAGGATGAAGAAACAGCAACACCTGGATGATCTTGTTGCTCAAGCAAACCAGCTCAATAAGGAGAATAACCAAATCAGCACAAGAGTAGAAATCACCACCCATCTGTACCTGAAAATTGAGGCTGAGAATGCAATTATCCGTGCTCAAGTTGCAGAACTAAGTAACAGGTTGCAATCACTTAATGAAATCATAAATTACATAAATTCACCATCATGCAATTATCTCATTGATGAAGATTATGAGGAGAATATGTTCAATGATTGTGGATTCATGATGGACCTGTGGAACACTGTGCCTGTCAAACAACCAATCATGGCCTCTGCTGACATGTTCATGTATTGA 495 0.4081 MASSPSGGYSGGSSSLQNSNSGSERDHQQHHVMDQKKRKRMLSNRESARRSRMKKQQHLDDLVAQANQLNKENNQISTRVEITTHLYLKIEAENAIIRAQVAELSNRLQSLNEIINYINSPSCNYLIDEDYEENMFNDCGFMMDLWNTVPVKQPIMASADMFMY* 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0557 164 PANTHER BZIP TRANSCRIPTION FACTOR 44 1 163 - -
Lan1g0557 164 SMART brlzneu 32 96 IPR004827 GO:0003700|GO:0006355
Lan1g0557 164 MobiDBLite consensus disorder prediction 1 57 - -
Lan1g0557 164 Coils Coil 52 79 - -
Lan1g0557 164 SUPERFAMILY Leucine zipper domain 36 87 IPR046347 GO:0003700|GO:0006355
Lan1g0557 164 Coils Coil 87 114 - -
Lan1g0557 164 CDD bZIP_plant_GBF1 37 87 IPR045314 GO:0003700|GO:0006355
Lan1g0557 164 MobiDBLite consensus disorder prediction 1 23 - -
Lan1g0557 164 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 39 54 IPR004827 GO:0003700|GO:0006355
Lan1g0557 164 Pfam bZIP transcription factor 36 88 IPR004827 GO:0003700|GO:0006355
Lan1g0557 164 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 34 81 IPR004827 GO:0003700|GO:0006355
Lan1g0557 164 Gene3D - 34 90 - -
Lan1g0557 164 PANTHER BZIP TRANSCRIPTION FACTOR BZIP124 1 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0557 Lan-Chr1 7329645 7330456 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g0557 32 164 bZIP Transcription Factor Family AT4G34590 49.650 2.50e-38 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lan1g0557 bZIP_1 4.1e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0557 K25786 - zju:107420484 164.851
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0505 12 11738096 11738820 Lan1g0557 1 7329645 7330456 LSH
Lan1g1741 1 31737313 31738784 Lan1g0557 1 7329645 7330456 LSH