Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0542 ATGGAAAACAATTGGGACCCTTTTGGATTATGGGTCCGAATTTGTTTTGGAATGGTTTCTTTTTGGGGAATTCAACAGTGTTGGTCTCTGAATGATGAAGGATTGGCTTTGTTGGAATTTCGGGTAAGGATTACTTCTGATCCTTATGGAAGTCTGGCAAATTGGAATCCAAATGATTGCGACCCTTGCATGTGGTCAGGCATTCATTGTGTTGATGGTAAAGTGCAAATGCTGAACTTGAATGGGCTATATTTGGAAGGGACATTGGCTCCTGAGCTTGGGAAACTTAGTCACTTAAAATCCCTTGTGTTATGCAAGAACAATTTTTCTGGCACCATTCCCAAAGAACTCGGAGATCTGCGCAAGCTGGAGTTATTAAATTTAAGGGAAAATAAATTTACTGGAAGTATCCCAGAAGAAATCGGCAGGATGTCATCGTTAAAACGGTTGGATTGTGACAACAAAATTGAAGACATTGATTCTGCAGAACTAGAAAAGCTCAGAGTGCCCTCTAAATTTCTATTTTATGACAATTATTCATCAAATCTTTTGGGCAGCAAGAACAGAAAGTTTGGACGCTGCAGTGTGTGGCATCGAGTCAAGCAATGGAACAAGGCAGATTCATTGGTTATTCCAATTAAAAGAGCACTTATAAAATACCTCAATGTCTTGGCATTGTCACTGTTCAAGCTACGAAAGGCTTCCCTTCATGACTATGAAGAGAATCGCTATAGCAATCTGCCTCGTTCTGAGGACAAAAAGATTGGCCGGAATGTATCAAATCTAGTCAATTCTGCACGTCGAAAGTTACTGGATCAGTCCAGTAACCTTGAAGCTGAGCCTTATAGTGGTGGTGGGCGTACTATACAGATCAATCCTCTTCCAACTACCCTGAGTAGTGGATCTTTCTCGGCTGTGCCAGATGCCAATAAGAAACAAAATCAGCCACCTGCATCGTTGACCTCACCTTCTAGTTCTCCACACGATACTCTGAATGAAAGAAGCGAACAACACGGAGGAAATGGTTCTTCTAGAAAATGGTGGAAGTATCTTATTATTATTTCAGTTGTGGCTGTCCTGGTCATTGCTATTATGGTCATGCTTTTCGTTTGGCGAAAACGAGCAGCAAAAGTGATAAAACCCTGGACAACAGGACTGAGTGGGCAGTTGCAGAAAGCATTTATAACAGGTGTCCCAAAGCTAAATCGGGCTGAGCTGGAGATAGCCTGCGAAGATTTCAGCAATATCGTTGCTAGCTTTAATGAATTCAACATATATAAAGGAACACTGTCCAGCGGAGTTGAGATTGCTGTTGTTTCTACAGTTATTGCTTCTTCCGAAGATTGGTCAAAGAGCATGCAGTCAGCCTATCGAAAAAAGATTGATACTTTGTCTCGTGTTAACCATAAGAACTTTGTCAATCTTATCGGGTACTGTGACGAGGAAGAACCATTCACAAGGATGATGGTGTTTGAGTATTCTCCAAATGGATGCCTATTCGAGCATCTGCATTCTAAGGATGTTGAACATCATCTTGATTGGAGTGAAAGGATGAGGATTATTATGGGCACGGCTTATTGTCTCGAGTACATGCATGATCGGAAACCATCAGTATTTCACACCAACCTTAGCTCACTATATATATTATTAACAGATGACTATGCTGCTAAGATTGGAGAGATGACTTTTGGCCAATGTATATTAACACCATCCAACAGAAGGGGAGATCCATCAAAGAAATGTGACTTGCCACCGCACTCTGATCCTGAAACCGATGTCTATAACTTCGGAATATTGTTGCTCGAAACCATTTCTGGGAAACTACCTTATTCTGAAGAACATGGCAACCTTGTGAACTGGGCGGCTGAGTACGTGAATGATAAACAAAGAATCCGTGACATGATCGATCCGACACTGCAGTCCTACAAAGACAACGAACTTAATGTCCTCTGTGAGGTGATCCAAGATTGCATTCTATCTGATCCAAGGTTAAGACCACCAATGAAGGACATAACTCCCAAACTAAGGGAAGGGCTTCAAGTATCACCTGAACAAGCAGTGCCTAGACTTTCTCCACTCTGGTGGGCTGAACTGGAGATCTTATCAGGGGAGGCCACTTAA 2121 0.4187 MENNWDPFGLWVRICFGMVSFWGIQQCWSLNDEGLALLEFRVRITSDPYGSLANWNPNDCDPCMWSGIHCVDGKVQMLNLNGLYLEGTLAPELGKLSHLKSLVLCKNNFSGTIPKELGDLRKLELLNLRENKFTGSIPEEIGRMSSLKRLDCDNKIEDIDSAELEKLRVPSKFLFYDNYSSNLLGSKNRKFGRCSVWHRVKQWNKADSLVIPIKRALIKYLNVLALSLFKLRKASLHDYEENRYSNLPRSEDKKIGRNVSNLVNSARRKLLDQSSNLEAEPYSGGGRTIQINPLPTTLSSGSFSAVPDANKKQNQPPASLTSPSSSPHDTLNERSEQHGGNGSSRKWWKYLIIISVVAVLVIAIMVMLFVWRKRAAKVIKPWTTGLSGQLQKAFITGVPKLNRAELEIACEDFSNIVASFNEFNIYKGTLSSGVEIAVVSTVIASSEDWSKSMQSAYRKKIDTLSRVNHKNFVNLIGYCDEEEPFTRMMVFEYSPNGCLFEHLHSKDVEHHLDWSERMRIIMGTAYCLEYMHDRKPSVFHTNLSSLYILLTDDYAAKIGEMTFGQCILTPSNRRGDPSKKCDLPPHSDPETDVYNFGILLLETISGKLPYSEEHGNLVNWAAEYVNDKQRIRDMIDPTLQSYKDNELNVLCEVIQDCILSDPRLRPPMKDITPKLREGLQVSPEQAVPRLSPLWWAELEILSGEAT* 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0542 706 Gene3D Ribonuclease Inhibitor 29 215 IPR032675 -
Lan1g0542 706 Gene3D Phosphorylase Kinase; domain 1 388 493 - -
Lan1g0542 706 MobiDBLite consensus disorder prediction 302 343 - -
Lan1g0542 706 ProSiteProfiles Protein kinase domain profile. 292 675 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan1g0542 706 PANTHER LRR RECEPTOR-LIKE KINASE 1 706 - -
Lan1g0542 706 SUPERFAMILY L domain-like 38 153 - -
Lan1g0542 706 Pfam Leucine rich repeat 97 151 IPR001611 GO:0005515
Lan1g0542 706 Pfam Leucine rich repeat N-terminal domain 31 70 IPR013210 -
Lan1g0542 706 Gene3D Transferase(Phosphotransferase) domain 1 495 687 - -
Lan1g0542 706 PANTHER PROTEIN MALE DISCOVERER 2 1 706 - -
Lan1g0542 706 MobiDBLite consensus disorder prediction 302 342 - -
Lan1g0542 706 Pfam Protein tyrosine and serine/threonine kinase 425 675 IPR001245 GO:0004672|GO:0006468
Lan1g0542 706 SUPERFAMILY Protein kinase-like (PK-like) 425 672 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0542 Lan-Chr1 6941443 6947757 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g0542 58 677 Receptor kinase-like Gene Family AT5G56040 23.353 9.52e-39 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Lan1g0542 PK_Tyr_Ser-Thr 5.7e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0542 - - gmx:100808098 876.315