Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0541 ATGGAGGATACAAATGAAACCACAACCACCAAATCATTCAACAAGAAAGAACCCACTAACATTTTACTAGGCCGTTTTGAGATAGGGAAACTCTTAGGCCATGGAAACTTTGCTAAGGTTCACTTAGCTCGTAATATCAAAACCGATGAGTGTGTTGCCATTAAGATCATTGATAAGGAGAAAATTCTTAAGGGTGGTCTTATGGGACATATCAAGCGTGAGATTTCCATCCTCCGCCGTGTCCGCCACCCCAACATCGTGCAACTCTTTGAAGTCATGGCCACCAAAACAAAGATTTACTTTGTTATGGAGTATGTACGTGGTGGCGAACTCTTCAACAAGGTTGCGAAAGGTAGGTTGAAGGAAGAAATTGCTAGAAAATACTTTCAGCAAATGGTATCAGCGGTAGGTTTTTGCCATGCTAGAGGTGTGTTCCATAGAGACATAAAACCAGAGAATTTGTTGCTTGATGAAAATGGTGAACTTAAAGTCTCAGATTTTGGTCTCAGTGCAGTGTCTGATCAAATAAGACAAGATGGGTTGTTCCACACGTTTTGTGGAACACCTGCATATGTTGCACCAGAGGTTTTGGGTAGAAAAGGTTATGATGGTGCAAAGGTTGATATTTGGTCATGTGGGGTTGTTCTGTTTGTTCTTATGGCTGGTTATTTACCCTTTCAAGATCAAAATGTTGTTGCTATGTATAGAAAGATTTATAAGGGTTCTTTTAGGTGTCCAAGGTGGTTTACACCAGAAATCACTAAGCTTCTTGCTAGGCTTCTTGATATAAACCCTCAAACCAGGATTTCCATTCCTGAAATCATGGAGAATAAGTGGTTCAAGAAAGGGTTCAACCCGATTAAGTTCTATGTTGAGGATGATATAGTTTGTAGTCTTGATGACAAGCTGAAAATGAGTGATGATGATGATGGAGCGGTTTCGGAATCTGATTTCGAGATTGTGACTAGAAGGAGGAATAACAATGTTTCATTGCCAAGGCCTGCAAGTCTGAATGCATTTGATATAATATCATTTTCATCAGGCTTCAATCTTTCTGGTCTATTTGAGGAAAAGGGCGACGAGGCGAGGTTCGTTTCGGGTGCTCCGGCTTCTAAGATCTTATCAAAGTTGGAGGAAGTTGCTCATTTGTTTAGCTTTACAGTGAGGAAGAAAGATTGCAGGGTGAGTTTGGAGGGTTCAAGAGAAGGTGTGAAGGGACCATTGACAATTGCTGCAGAGATATTTGAGTTAACACCTTCTTTGGTGGTAGTGGAGGTGAAGAAAAAAGGAGGGGATAGTGAAGAGTATGAGAAATTTTGTAACATTGAATTGAAACCTGCTTTGGAGAATTTGATGGTGGAGGAAGAATCTGCAAGTTCTTCATGTCCACCTATTCCCACTGAACCTTTTAAATTTCGTGCTCTTTCTTTCTCTCCACTTGGAAGGCCTTCAGATGCCAAATCTTTGTTCATAGATACCTGA 1482 0.4062 MEDTNETTTTKSFNKKEPTNILLGRFEIGKLLGHGNFAKVHLARNIKTDECVAIKIIDKEKILKGGLMGHIKREISILRRVRHPNIVQLFEVMATKTKIYFVMEYVRGGELFNKVAKGRLKEEIARKYFQQMVSAVGFCHARGVFHRDIKPENLLLDENGELKVSDFGLSAVSDQIRQDGLFHTFCGTPAYVAPEVLGRKGYDGAKVDIWSCGVVLFVLMAGYLPFQDQNVVAMYRKIYKGSFRCPRWFTPEITKLLARLLDINPQTRISIPEIMENKWFKKGFNPIKFYVEDDIVCSLDDKLKMSDDDDGAVSESDFEIVTRRRNNNVSLPRPASLNAFDIISFSSGFNLSGLFEEKGDEARFVSGAPASKILSKLEEVAHLFSFTVRKKDCRVSLEGSREGVKGPLTIAAEIFELTPSLVVVEVKKKGGDSEEYEKFCNIELKPALENLMVEEESASSSCPPIPTEPFKFRALSFSPLGRPSDAKSLFIDT* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0541 493 PANTHER - 6 459 - -
Lan1g0541 493 ProSiteProfiles Protein kinase domain profile. 26 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan1g0541 493 Pfam Protein kinase domain 26 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan1g0541 493 ProSitePatterns Protein kinases ATP-binding region signature. 32 55 IPR017441 GO:0005524
Lan1g0541 493 SUPERFAMILY Protein kinase-like (PK-like) 22 291 IPR011009 -
Lan1g0541 493 CDD CIPK_C 338 448 - -
Lan1g0541 493 SMART serkin_6 26 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan1g0541 493 ProSiteProfiles NAF domain profile. 332 356 IPR018451 GO:0007165
Lan1g0541 493 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 6 459 - -
Lan1g0541 493 Pfam NAF domain 334 390 IPR004041 GO:0007165
Lan1g0541 493 Gene3D Kinase associated domain 1, KA1 332 453 - -
Lan1g0541 493 ProSitePatterns Serine/Threonine protein kinases active-site signature. 144 156 IPR008271 GO:0004672|GO:0006468
Lan1g0541 493 Gene3D Transferase(Phosphotransferase) domain 1 16 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0541 Lan-Chr1 6928709 6931319 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g0541 4 479 CBL-interacting serine-threonine protein kinases AT4G18700 73.101 0.0 720
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Lan1g0541 Pkinase 9.6e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0541 - - lang:109348755 972.23