Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0533 ATGGATAGTAAATTGAGAAATACTAGTTCATATATGAATGAACAAGAGGATAGTGATGTAGGAGGCCAAGAAAACTTTGTGGAGTCTTCTCCTTATAACATGGATGCCATGGTTACTTCTCCATCCACTTCTACCTCTTCACTTAAGAGAAGGCGAGGCACACAGAAAAAGGTTGTTCAAATCCCAATCAAGGAAATTGAAGGTTCAATTAGCAATACTCCACCCTCGGATTCATGGGCATGGCGAAAATATGGCCAGAAACCCATCAAAGGTTCTCCTTATCCCAGAGGATACTACAGATGTAGCAGTAACAAAGGATGTCCGGCAAGGAAACAAGTAGAAAGGAGCCGCATAGACCCCACCATACTAGTGGTTACTTACTCCTCCGAGCACAACCACGCATCACCTGTTTTCAAAAACCACCACCACCATAATCACAGCCGCAACAACAACAATAACCGCTCTTCCTCCACTGCTGCAAAACCCATCATAAAACCCGAACTAGAACAGGTTCTCGCTGAACCGGTCGAACCAGAGCTCATTGCTGAGCCGGTTGAACCGGAGCTCATTGCTGAGCCGGTTGAACCGGAGGATAAGTTTTCGGACGAGTTTGGGTGGTTTGGGGAGATGGAGGCAATTGCTACGACGTCGTCCACGGTTCTTGAAAGTCCAATATTTGGAGGGTACGATGATGACGTAGCGTCAGTGTTTGTTCCCATGAGAGAGGAGGATGAGTTACTGTTCGCTGACCTTGGTGAGCTGCCGGAGTTCTCGCCGGTGTTCAAGCGGGGGTCGCTAGAGACAGCGGATGAGTGGCGGGGATGGTGTGGGACCACAAGCTGA 843 0.484 MDSKLRNTSSYMNEQEDSDVGGQENFVESSPYNMDAMVTSPSTSTSSLKRRRGTQKKVVQIPIKEIEGSISNTPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSNKGCPARKQVERSRIDPTILVVTYSSEHNHASPVFKNHHHHNHSRNNNNNRSSSTAAKPIIKPELEQVLAEPVEPELIAEPVEPELIAEPVEPEDKFSDEFGWFGEMEAIATTSSTVLESPIFGGYDDDVASVFVPMREEDELLFADLGELPEFSPVFKRGSLETADEWRGWCGTTS* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0533 280 Pfam WRKY DNA -binding domain 77 133 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan1g0533 280 SUPERFAMILY WRKY DNA-binding domain 72 136 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan1g0533 280 Gene3D WRKY domain 63 137 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan1g0533 280 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 24 278 IPR044810 GO:0003700
Lan1g0533 280 ProSiteProfiles WRKY domain profile. 76 136 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan1g0533 280 MobiDBLite consensus disorder prediction 1 49 - -
Lan1g0533 280 MobiDBLite consensus disorder prediction 1 60 - -
Lan1g0533 280 MobiDBLite consensus disorder prediction 134 158 - -
Lan1g0533 280 PANTHER OS01G0750100 PROTEIN 24 278 - -
Lan1g0533 280 SMART WRKY_cls 75 135 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0533 Lan-Chr1 6455618 6458107 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g0533 1 265 WRKY Transcription Factor Family AT1G29280 50.545 3.41e-65 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lan1g0533 WRKY 4.1e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0533 - - lang:109348688 540.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0525 12 12003647 12006628 Lan1g0533 1 6455618 6458107 LSH