Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0530 ATGAAGTGGGGTGGTAAAAAACCTTCTTCAGCTTCACCACCTTCTTCTTATAAATCCTTTTTTCTCTCTCATTTTTCATGGCTATCAAAGTTCAAGCATATGAGAATAATCTCAGAGCCAAAACCTCCAAAACTGAAGCAGAATTCTCCATTTAGTGAAGACAAAGAGCATCATAACAAAACTGAAGAAGATATTACCAACCCATCAACAGTGTTATATAATTTGGAAGATGAGTTGAAGATGGAAAGGTTCAATGCTAAAAGAAATAGAACAAGACAATGCAGAGAAGAAAAAGATAGAAAATTTCCAAATGAAATAGAAGTTTCATTGGAGATTGATGAGTGTGATAGAGAAAAGGAACTTCGGTACTTGAAAAGAAGGTATGAGAGGAAAGTACAAAATGTTTTGGAAGAGAAACTCTTGAAATTTGAAAGAACAGAAGAGAAAGGTGAAAAGGGTACGCTGCAAAATGATTCACCTAGAACAATTTGTACACCAAGAACACATTTTAGAAGAAGTGAAGAAGCTTATGAGAAGAAACAAAGTGTTGAGTTGAATGCAAAAGTTAACAAACAAAAGCTATCAGTTAATTTGAGCAGAGAAATCCATAGGAGGAAAACAAAGCCTAGCTTCAAGGTAAGAGTAAATTCACCAAGAATGGCTTCCAAGGTTGAAATATGCAAAATTAAGGCTATAGAGGATATGAAGAAAGCTAGATTGAAAATGAAGAAAGAAGAGGAAACTTTGAAGGGAAAATCAAGCCTAGATCATAGCTTTGCTGTGGTGAAATGCTCGGTCGATCCGGGTCGAGATTTTAGAGACTCCATGATTGAGATGATCACTGAGAAGCAGATCAATAAGCCAGAAGAAATGGAAGAGCTTTTGGCATGTTATTTGACTTTGAATTCTAGTGAGTATCATGATCTCATTATCAAAGTGTTCAAGCAGGTTTGGTTGTATATGAACCAAGCTAGTTGGTGTGTTAAATCAAACAAGCCAATGAAGCAATGTTGTTAG 1017 0.3559 MKWGGKKPSSASPPSSYKSFFLSHFSWLSKFKHMRIISEPKPPKLKQNSPFSEDKEHHNKTEEDITNPSTVLYNLEDELKMERFNAKRNRTRQCREEKDRKFPNEIEVSLEIDECDREKELRYLKRRYERKVQNVLEEKLLKFERTEEKGEKGTLQNDSPRTICTPRTHFRRSEEAYEKKQSVELNAKVNKQKLSVNLSREIHRRKTKPSFKVRVNSPRMASKVEICKIKAIEDMKKARLKMKKEEETLKGKSSLDHSFAVVKCSVDPGRDFRDSMIEMITEKQINKPEEMEELLACYLTLNSSEYHDLIIKVFKQVWLYMNQASWCVKSNKPMKQCC* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0530 338 MobiDBLite consensus disorder prediction 48 63 - -
Lan1g0530 338 Coils Coil 228 248 - -
Lan1g0530 338 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 19 327 IPR038933 GO:0045892
Lan1g0530 338 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 259 321 IPR006458 -
Lan1g0530 338 Pfam Transcriptional repressor, ovate 265 320 IPR006458 -
Lan1g0530 338 PANTHER TRANSCRIPTION REPRESSOR OFP4 19 327 - -
Lan1g0530 338 ProSiteProfiles OVATE domain profile. 261 320 IPR006458 -
Lan1g0530 338 MobiDBLite consensus disorder prediction 38 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0530 Lan-Chr1 6367672 6368917 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Lan1g0530 Ovate 8.2e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0530 - - gmx:100794362 290.041