Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0527 ATGGCTGAAAATTCAGAAAGAAATGCAACCCATGATGTTGTTTTAAATCTAAACAATGTTTCCTCCAGATCAACACAAAATTCAACCACCTTCATCTCTCTACCCTTCTTGCAAAAGTTGGTAGCTGAGGCGGTAGGAACATATTTCTTAATATTTGCAGGATGTTGTTCAGTTGTAGTAAACAAGAACAACAACAACGTCGTAACACTTCCTGGAATTTCAATTGTTTGGGGAGTGGTTGTGACGGTGCTTGCCTATTCTGTTGGTCATATATCTGGTGCACATTTCAATCCTGCTGTCACAATTGCTTTAGCCACAACTAAAAGGTTTCCATGGAAACAGGTACCAGCTTATGTAGTAACTCAAGTCCTTGCATCAACACTTGCAAGTGGAACTCTAAGACTAATGTTTAGTGGGAAGGAGAACCAGTTTCCAGGAACATTACCAGCTGGGTCTAATCTACAAGCTTTTGTGATGGAATTCATAATCACTTTTCACCTTATGTTTGTCATATCTGGGGTTGTCACTGATGACAGAGCGATCGGTGCCTTGGGTGGGATTGCAGTGGGATTAACAGTATTGCTGAATGTCATGATTGCAGCGCCAATAACAGGAGCATCACTGAACCCTGCTAGAAGCCTAGGACCTGCATTTGTACACAATGAATACAGAGGAATATGGGTATATTTGGTAGCTCCAACTTTAGGAGCCATTGCTGGTGCATGGGTTTACAACATTATGAGGTACACAGATAAATCATTGAGTGATATCACCAAAAGTGCATCTTTCCTCAAAAAAGAAAGGCATGAAGGTGACTAA 819 0.409 MAENSERNATHDVVLNLNNVSSRSTQNSTTFISLPFLQKLVAEAVGTYFLIFAGCCSVVVNKNNNNVVTLPGISIVWGVVVTVLAYSVGHISGAHFNPAVTIALATTKRFPWKQVPAYVVTQVLASTLASGTLRLMFSGKENQFPGTLPAGSNLQAFVMEFIITFHLMFVISGVVTDDRAIGALGGIAVGLTVLLNVMIAAPITGASLNPARSLGPAFVHNEYRGIWVYLVAPTLGAIAGAWVYNIMRYTDKSLSDITKSASFLKKERHEGD* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0527 272 PANTHER MAJOR INTRINSIC PROTEIN (MIP) FAMILY TRANSPORTER 1 266 - -
Lan1g0527 272 CDD MIP 38 247 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan1g0527 272 SUPERFAMILY Aquaporin-like 31 253 IPR023271 -
Lan1g0527 272 TIGRFAM MIP: MIP family channel proteins 42 244 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan1g0527 272 PANTHER AQUAPORIN NIP2-1 1 266 IPR034294 -
Lan1g0527 272 PRINTS Major intrinsic protein family signature 38 57 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan1g0527 272 PRINTS Major intrinsic protein family signature 77 101 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan1g0527 272 PRINTS Major intrinsic protein family signature 114 133 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan1g0527 272 PRINTS Major intrinsic protein family signature 159 177 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan1g0527 272 PRINTS Major intrinsic protein family signature 190 212 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan1g0527 272 PRINTS Major intrinsic protein family signature 227 247 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan1g0527 272 Pfam Major intrinsic protein 33 244 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan1g0527 272 ProSitePatterns MIP family signature. 95 103 IPR022357 -
Lan1g0527 272 Gene3D Glycerol uptake facilitator protein. 2 259 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0527 Lan-Chr1 6307261 6311220 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g0527 38 265 Major Intrinsic Protein MIP AT5G37820 60.526 1.34e-97 287
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0527 K09874 - gmx:100798526 398.667