Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0509 ATGGCGGTTCCACTACTTACGAAGAATATCGTGAAGAAGCGCGTCAAGAGGTTCAAGCGTCCTCAGAGCGATCGCAAAATCTCCGTCAAGGTTATGTATTTTAATTCTTCCCGCAGACCAAAGGGTATTGATTCACGTGTCAGGAGGAAGTTCAAGGGATGTGTGTTGATGCCAAACATTGGTTATGGTTCAGACAAGAAGACTCATCACTATCTCCCTAACGGTTTCAAGAAATTTGTTGTCCACAATGTGAACGACTTAGAACTGCTTTTGATGCATAACAGGACTTACTGCGCCGAGATTGCTCACAATATATCAACAAGAAAGTGGAAGGAAATAGTTGAGAGAGCTGCTCAACTTGATGTTGTTGTCACAAACAAAATTGCTAGACTAAGTAGCCAAGAGGATGAGTAG 414 0.4251 MAVPLLTKNIVKKRVKRFKRPQSDRKISVKVMYFNSSRRPKGIDSRVRRKFKGCVLMPNIGYGSDKKTHHYLPNGFKKFVVHNVNDLELLLMHNRTYCAEIAHNISTRKWKEIVERAAQLDVVVTNKIARLSSQEDE* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0509 137 SUPERFAMILY Ribosomal protein L32e 2 135 IPR036351 -
Lan1g0509 137 Pfam Ribosomal protein L32 16 126 IPR001515 GO:0003735|GO:0005840|GO:0006412
Lan1g0509 137 PANTHER 60S RIBOSOMAL PROTEIN L32-1 1 137 - -
Lan1g0509 137 PANTHER 60S RIBOSOMAL PROTEIN L32 AND DNA-DIRECTED RNA POLYMERASE II, SUBUNIT N 1 137 IPR001515 GO:0003735|GO:0005840|GO:0006412
Lan1g0509 137 CDD Ribosomal_L32_L32e 16 126 IPR001515 GO:0003735|GO:0005840|GO:0006412
Lan1g0509 137 SMART Ribosomal_L32e_2 15 126 IPR001515 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0509 Lan-Chr1 5817037 5818865 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g0509 1 137 Cytoplasmic Ribosomal Protein Gene Family AT4G18100 78.102 9.80e-77 222
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0509 K02912 - jre:109008502 237.654