Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0495 ATGGGTAATTGCTGGTGTAGGCTGGAATCACAAGATTATAGAGTTTCAGTCAATGCAAAACCAGAGCAAAACCAGGCAATGAAACAAAGGAATGATGATAGTAAGTTACCATCTAATCCTGAAGAAGTAGAAGTTCTGCGGCGCGATTCCGCTGTGAATCCATTGGTTGCATTCACTTATGATGAGCTAAAGATAATGACTGGAAATTTTAGGCCAGATAGTGTGTTAGGAGGAGGTGGATTTGGAAGTGTTTATAAAGGCTTTATTTCTGAGGAGTTAAGACAAGGGCTTCCTCCTCTGGCTGTAGCTGTTAAGGTTCATGATGGTGATAATAGTCATCAAGGACACAGAGAATGGCTGGCCGAAGTTATATTTCTGGGGCAGCTTTCACATCCAAATCTAGTGAAATTAATTGGATACTGCTGTGAAGATGAACATAGGGTGCTAATATATGAGTATATGGCTAGGGGAAGTGTGGAAAACAATTTGTTCTCTAAAATATTGCTTCCCTTGCCATGGTCCATACGAATGAAGATTGCATTTGGTGCTGCAAAGGGACTTGCATTTCTTCATGAAGCAGAGAAACCTGTCATCTACCGTGATTTCAAGACATCTAATATTTTATTGGACTCGGACTATAATGCAAAACTTTCTGACTTTGGCCTCGCTAAAGATGGACCAGTTGGAGACAAATCTCATGTTTCCACTCGCATAATGGGAACATATGGTTATGCTGCACCTGAATACATAATGACAGGTCATCTGACCCCTAGAAGTGATGTTTACAGTTTTGGTGTAGTTCTTCTTGAACTTCTGAGTGGAAGAAAATCCTTAGACAAGTTCAGACCAGCTAGAGAGCAGAACCTTACAGATTGGGCACTTCCATTGCTGAAGGAAAAGAAGAAAATACTAAATATTATAGATCCAAAGCTAGAAGGCGATTATCCAATAAAAAGTGTTCACAAGGCTGCAATGCTTGCTTATCATTGCTTGAACAGAAACCCAAAAGCAAGGCCTCTAATGCGAGATATAGTAGATTCATTGGAGCCTTTGCAGCAGGCACACAATGAGGTACCTATTGAAAAAACATTCACCATAATCAATGATGTTCCTGAAACAGATTTGAAAAAGAAAGATGCAGAATAA 1146 0.3979 MGNCWCRLESQDYRVSVNAKPEQNQAMKQRNDDSKLPSNPEEVEVLRRDSAVNPLVAFTYDELKIMTGNFRPDSVLGGGGFGSVYKGFISEELRQGLPPLAVAVKVHDGDNSHQGHREWLAEVIFLGQLSHPNLVKLIGYCCEDEHRVLIYEYMARGSVENNLFSKILLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDSDYNAKLSDFGLAKDGPVGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLELLSGRKSLDKFRPAREQNLTDWALPLLKEKKKILNIIDPKLEGDYPIKSVHKAAMLAYHCLNRNPKARPLMRDIVDSLEPLQQAHNEVPIEKTFTIINDVPETDLKKKDAE* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0495 381 ProSitePatterns Serine/Threonine protein kinases active-site signature. 197 209 IPR008271 GO:0004672|GO:0006468
Lan1g0495 381 Pfam Protein tyrosine and serine/threonine kinase 74 348 IPR001245 GO:0004672|GO:0006468
Lan1g0495 381 MobiDBLite consensus disorder prediction 26 40 - -
Lan1g0495 381 Gene3D Phosphorylase Kinase; domain 1 31 153 - -
Lan1g0495 381 Gene3D Transferase(Phosphotransferase) domain 1 154 370 - -
Lan1g0495 381 ProSitePatterns Protein kinases ATP-binding region signature. 76 105 IPR017441 GO:0005524
Lan1g0495 381 CDD STKc_IRAK 76 351 - -
Lan1g0495 381 ProSiteProfiles Protein kinase domain profile. 70 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan1g0495 381 SUPERFAMILY Protein kinase-like (PK-like) 44 348 IPR011009 -
Lan1g0495 381 MobiDBLite consensus disorder prediction 18 40 - -
Lan1g0495 381 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL16-RELATED 10 361 - -
Lan1g0495 381 PANTHER OS01G0588500 PROTEIN-RELATED 10 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0495 Lan-Chr1 5660412 5666740 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g0495 23 348 Glycoside Hydrolase AT3G07070 48.214 5.55e-104 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lan1g0495 PK_Tyr_Ser-Thr 1.7e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0495 - - gmx:100775722 675.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0554 12 12249837 12260582 Lan1g0495 1 5660412 5666740 LSH