Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lan1g0495 | ATGGGTAATTGCTGGTGTAGGCTGGAATCACAAGATTATAGAGTTTCAGTCAATGCAAAACCAGAGCAAAACCAGGCAATGAAACAAAGGAATGATGATAGTAAGTTACCATCTAATCCTGAAGAAGTAGAAGTTCTGCGGCGCGATTCCGCTGTGAATCCATTGGTTGCATTCACTTATGATGAGCTAAAGATAATGACTGGAAATTTTAGGCCAGATAGTGTGTTAGGAGGAGGTGGATTTGGAAGTGTTTATAAAGGCTTTATTTCTGAGGAGTTAAGACAAGGGCTTCCTCCTCTGGCTGTAGCTGTTAAGGTTCATGATGGTGATAATAGTCATCAAGGACACAGAGAATGGCTGGCCGAAGTTATATTTCTGGGGCAGCTTTCACATCCAAATCTAGTGAAATTAATTGGATACTGCTGTGAAGATGAACATAGGGTGCTAATATATGAGTATATGGCTAGGGGAAGTGTGGAAAACAATTTGTTCTCTAAAATATTGCTTCCCTTGCCATGGTCCATACGAATGAAGATTGCATTTGGTGCTGCAAAGGGACTTGCATTTCTTCATGAAGCAGAGAAACCTGTCATCTACCGTGATTTCAAGACATCTAATATTTTATTGGACTCGGACTATAATGCAAAACTTTCTGACTTTGGCCTCGCTAAAGATGGACCAGTTGGAGACAAATCTCATGTTTCCACTCGCATAATGGGAACATATGGTTATGCTGCACCTGAATACATAATGACAGGTCATCTGACCCCTAGAAGTGATGTTTACAGTTTTGGTGTAGTTCTTCTTGAACTTCTGAGTGGAAGAAAATCCTTAGACAAGTTCAGACCAGCTAGAGAGCAGAACCTTACAGATTGGGCACTTCCATTGCTGAAGGAAAAGAAGAAAATACTAAATATTATAGATCCAAAGCTAGAAGGCGATTATCCAATAAAAAGTGTTCACAAGGCTGCAATGCTTGCTTATCATTGCTTGAACAGAAACCCAAAAGCAAGGCCTCTAATGCGAGATATAGTAGATTCATTGGAGCCTTTGCAGCAGGCACACAATGAGGTACCTATTGAAAAAACATTCACCATAATCAATGATGTTCCTGAAACAGATTTGAAAAAGAAAGATGCAGAATAA | 1146 | 0.3979 | MGNCWCRLESQDYRVSVNAKPEQNQAMKQRNDDSKLPSNPEEVEVLRRDSAVNPLVAFTYDELKIMTGNFRPDSVLGGGGFGSVYKGFISEELRQGLPPLAVAVKVHDGDNSHQGHREWLAEVIFLGQLSHPNLVKLIGYCCEDEHRVLIYEYMARGSVENNLFSKILLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDSDYNAKLSDFGLAKDGPVGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLELLSGRKSLDKFRPAREQNLTDWALPLLKEKKKILNIIDPKLEGDYPIKSVHKAAMLAYHCLNRNPKARPLMRDIVDSLEPLQQAHNEVPIEKTFTIINDVPETDLKKKDAE* | 382 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lan1g0495 | 381 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 197 | 209 | IPR008271 | GO:0004672|GO:0006468 | |
Lan1g0495 | 381 | Pfam | Protein tyrosine and serine/threonine kinase | 74 | 348 | IPR001245 | GO:0004672|GO:0006468 | |
Lan1g0495 | 381 | MobiDBLite | consensus disorder prediction | 26 | 40 | - | - | |
Lan1g0495 | 381 | Gene3D | Phosphorylase Kinase; domain 1 | 31 | 153 | - | - | |
Lan1g0495 | 381 | Gene3D | Transferase(Phosphotransferase) domain 1 | 154 | 370 | - | - | |
Lan1g0495 | 381 | ProSitePatterns | Protein kinases ATP-binding region signature. | 76 | 105 | IPR017441 | GO:0005524 | |
Lan1g0495 | 381 | CDD | STKc_IRAK | 76 | 351 | - | - | |
Lan1g0495 | 381 | ProSiteProfiles | Protein kinase domain profile. | 70 | 358 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Lan1g0495 | 381 | SUPERFAMILY | Protein kinase-like (PK-like) | 44 | 348 | IPR011009 | - | |
Lan1g0495 | 381 | MobiDBLite | consensus disorder prediction | 18 | 40 | - | - | |
Lan1g0495 | 381 | PANTHER | SERINE/THREONINE-PROTEIN KINASE PBL16-RELATED | 10 | 361 | - | - | |
Lan1g0495 | 381 | PANTHER | OS01G0588500 PROTEIN-RELATED | 10 | 361 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lan1g0495 | Lan-Chr1 | 5660412 | 5666740 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lan1g0495 | 23 | 348 | Glycoside Hydrolase | AT3G07070 | 48.214 | 5.55e-104 | 311 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-VIIa-2 | Lan1g0495 | PK_Tyr_Ser-Thr | 1.7e-45 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lan1g0495 | - | - | gmx:100775722 | 675.626 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lan12g0554 | 12 | 12249837 | 12260582 | Lan1g0495 | 1 | 5660412 | 5666740 | LSH |