Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0491 ATGGAAAGCATTGCCGCGCAGCTGAACTGCGGCATCTCCCGCCAATTCTCCACAGGTGGTGGCGCATCAATGCGCCGCAACCTGACCAGGCAGTTCACGCGCCAGTCCTCTATGGACCCGAGGCGTAACAACCTCAGGTTCAGCTTTGGAAGGCAGTCATCGCTCGATCCGATCCGGCGTGGTAGTCCTACGCCGGATCATATCGAGCTGACGGTGCCTGAGAACCTGGACTTGACGATGCAGCTGTTGTTTATGGCGTGTAGGGGGGATATGAAGGGAGTGGAGGATTTGTTGAATGAGGGCATTGATGTAAATAGCATTGACCTTGATGGACGAACTGCTCTTCATGTTGCTGCTTGTGAGGGGTATGTTGAGGTTGTTAGGCTCTTGCTTTCGCGTAAGGCTAATATCGATGCTCGTGATCGCTGGGGCAGTACGGCAGCAGCTGATGCCAAACATTATGGGAATTCAGAAATTTATTATATGCTCAAGGCCCGTGGAGCAAAAGTGCCGAAAGTCAATAAGACTCCAATGACTGTTGCAAATCCCCGTGAAGTTCCAGAGTATGAACTCAATCCATTAGAACTCCAGGTCAGGAAGAGTGATGGTATTTCAAAGGGGACATATCAAGTAGCTAAATGGAATGGCACAAAAGTTTCAGTGAAGATACTCGATAAGGACAGTTATTCAGATATTGATAGCATAGATGCTTTCAAACATGAGCTTACATTATTAGAAAGGGTACGACATCCTAATGTGGTCCAGTTTGTTGGAGCTGTCACCCAAAATATACCTATGATGATTGTTGTAGAATACCATGCTAAGGGTGACCTAGCAAGCTATCTTCAAAAGAAAGGCCGTTTGTCCCCATCAAAAGCTCTACGATTTGCTCTTGATATTGCCAGGGGAATGAACTATCTGCATGAATGCAAACCAGATCCAGTTATGCACTGTGATTTAACGCCAAAAAATATTTTGCTGGATAATGGAGGGCAATTGAAGATAGCTGGATTTGGCAATGTCAGATTATCACAAATGTCGTCTGATAAAGTAAGGATGGTACGGCCCGAGGCTGATATTGACCTTTCAAACTTGTACTTGGCACCGGAGATTTACAAAGATGAAGAATTTGATAGAACTGTGGATGCTTATTCCTTTGGTCTCATTGTATATGAGATGATTGAAGGTACACAGCCCTTTCAACCCAAGTCCGCCGAGGAGGCTGCGAAACTCTTGTGCTTAGAAGGGAGAAGACCAGCATTCAAGATAAAAACAAAACATTATCCTCCGGATTTGAAAGAATTGATTGAGGAATGTTGGGATTCAGAGCCTCTTGTCAGACCAACATTTTCACAGGTCATTGTACGGCTAGACAGAATTGTTGCACATTGCGCAAAACAAGGATGGTGGAAAGATGCTTTTAAACTTCCTTGGAAATAA 1440 0.4493 MESIAAQLNCGISRQFSTGGGASMRRNLTRQFTRQSSMDPRRNNLRFSFGRQSSLDPIRRGSPTPDHIELTVPENLDLTMQLLFMACRGDMKGVEDLLNEGIDVNSIDLDGRTALHVAACEGYVEVVRLLLSRKANIDARDRWGSTAAADAKHYGNSEIYYMLKARGAKVPKVNKTPMTVANPREVPEYELNPLELQVRKSDGISKGTYQVAKWNGTKVSVKILDKDSYSDIDSIDAFKHELTLLERVRHPNVVQFVGAVTQNIPMMIVVEYHAKGDLASYLQKKGRLSPSKALRFALDIARGMNYLHECKPDPVMHCDLTPKNILLDNGGQLKIAGFGNVRLSQMSSDKVRMVRPEADIDLSNLYLAPEIYKDEEFDRTVDAYSFGLIVYEMIEGTQPFQPKSAEEAAKLLCLEGRRPAFKIKTKHYPPDLKELIEECWDSEPLVRPTFSQVIVRLDRIVAHCAKQGWWKDAFKLPWK* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0491 479 ProSiteProfiles Protein kinase domain profile. 194 461 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan1g0491 479 ProSiteProfiles Ankyrin repeat profile. 110 142 IPR002110 GO:0005515
Lan1g0491 479 PRINTS Tyrosine kinase catalytic domain signature 270 283 IPR001245 GO:0004672|GO:0006468
Lan1g0491 479 PRINTS Tyrosine kinase catalytic domain signature 309 327 IPR001245 GO:0004672|GO:0006468
Lan1g0491 479 PRINTS Tyrosine kinase catalytic domain signature 381 403 IPR001245 GO:0004672|GO:0006468
Lan1g0491 479 PRINTS Tyrosine kinase catalytic domain signature 428 450 IPR001245 GO:0004672|GO:0006468
Lan1g0491 479 Gene3D Transferase(Phosphotransferase) domain 1 274 472 - -
Lan1g0491 479 Pfam Ankyrin repeats (3 copies) 84 170 IPR002110 GO:0005515
Lan1g0491 479 SUPERFAMILY Protein kinase-like (PK-like) 208 457 IPR011009 -
Lan1g0491 479 SUPERFAMILY Ankyrin repeat 81 180 IPR036770 -
Lan1g0491 479 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE 35 477 - -
Lan1g0491 479 Pfam Protein tyrosine and serine/threonine kinase 204 456 IPR001245 GO:0004672|GO:0006468
Lan1g0491 479 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 35 477 - -
Lan1g0491 479 ProSiteProfiles Ankyrin repeat region circular profile. 110 142 - -
Lan1g0491 479 Gene3D - 63 189 IPR036770 -
Lan1g0491 479 Gene3D Phosphorylase Kinase; domain 1 191 273 - -
Lan1g0491 479 ProSitePatterns Tyrosine protein kinases specific active-site signature. 315 327 IPR008266 GO:0004672|GO:0006468
Lan1g0491 479 CDD STKc_MAP3K-like 204 457 - -
Lan1g0491 479 SMART ANK_2a 110 139 IPR002110 GO:0005515
Lan1g0491 479 SMART ANK_2a 78 106 IPR002110 GO:0005515
Lan1g0491 479 PIRSF ILK 8 478 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0491 Lan-Chr1 5592018 5598271 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g0491 1 479 MAP Kinase Kinase Kinase AT2G31800 74.113 0.0 768
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Lan1g0491 PK_Tyr_Ser-Thr 2.5e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0491 - - gmx:100810411 819.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0557 12 12293384 12299575 Lan1g0491 1 5592018 5598271 LSH