Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0490 ATGGCAAATTCAAAGGGCTCATCGGGTGTCAGAAATTTCATGTATCCTGGAAAGCATCCTCTTCTTCCTCCTAAAAGTCCATTTCCGAGTGTTTCGCAAGCATATGTCGATTATGTCCCAAATTCTGCAGTTGGTTCAAAGGCTGTTCAGAAACCTAGAGAGGGAAACACACACCACCAACGTACTTCATCTGAGAGCCATATTATGGAGGAGCAACCTTCATGGCTTGATGATCTCCTTAATGAGCCAGAAATACCTGTGCGAAGGGGTGGTCATCGGCGTTCGTCAAGCGATTCTTCTTTTGCATACTTAGATACATTTAATGCGACCAACATCAATTATGCTGAGCAGAATTTGCTATCTATTCCATCTTGGGTATCTCAAGAATTTGATCATGGCAAAGATGCTCGTCATATACCCACGTATGCAGAAATGAATGCAGCAAAACAGAGAAATAGGTCATGGGACTCATTTTCAAATGCCATGACTCATCCAGGTATTGCTCCCTCTAGCAAAGAAAATGTTGCATTGAAGAGTTCAGGATCACCATATGCACCACATGAAGCAGATATACTTCCATCGACTGCAAATGAAAAGTATGATTCAGTAGAATCTGGCATACAGGATACAAAATCATCTTCTGAACGAAAGGATGGTTCACATGCAAAGTCTTCTGCTTCTGAGACAGATACAAAACGTGCTAAACAGCAATTTGCACAACGTTCACGAGTCCGCAAACTTCAATACATAGCTGAGCTGGAAAGAAATGTACAAGCTTTACAGGCGGAAGGGTCTGAAGTGTCAGCTGAACTAGAATTTCTTAACCAGCAGAATCTTATCCTGAGCATGGAGAATAAAGCACTCAAGCAACGTTTAGAAAGTTTAGCACAGGAGCAGCTTATCAAATATCTGGAACAGGAAGTACTGGAAAGAGAGATTGGAAGATTGCGGACATTATATCAGCAGCAGCAGCAGATACATCAGCCACAACAACCATCAACTAGTCATAGGCGCACCAACAGCAGAGACCTCGAATCTCAGTTTGCAAACATTTCTCTAAAACACAAGGACACCAATTCCGGGCATGATCCCACGACCGGAGCACTCAGAATTTAG 1116 0.4265 MANSKGSSGVRNFMYPGKHPLLPPKSPFPSVSQAYVDYVPNSAVGSKAVQKPREGNTHHQRTSSESHIMEEQPSWLDDLLNEPEIPVRRGGHRRSSSDSSFAYLDTFNATNINYAEQNLLSIPSWVSQEFDHGKDARHIPTYAEMNAAKQRNRSWDSFSNAMTHPGIAPSSKENVALKSSGSPYAPHEADILPSTANEKYDSVESGIQDTKSSSERKDGSHAKSSASETDTKRAKQQFAQRSRVRKLQYIAELERNVQALQAEGSEVSAELEFLNQQNLILSMENKALKQRLESLAQEQLIKYLEQEVLEREIGRLRTLYQQQQQIHQPQQPSTSHRRTNSRDLESQFANISLKHKDTNSGHDPTTGALRI* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0490 371 Coils Coil 243 298 - -
Lan1g0490 371 MobiDBLite consensus disorder prediction 158 239 - -
Lan1g0490 371 PANTHER BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN-RELATED 1 359 IPR044797 -
Lan1g0490 371 MobiDBLite consensus disorder prediction 158 178 - -
Lan1g0490 371 MobiDBLite consensus disorder prediction 46 71 - -
Lan1g0490 371 MobiDBLite consensus disorder prediction 350 371 - -
Lan1g0490 371 SUPERFAMILY Leucine zipper domain 239 281 IPR046347 GO:0003700|GO:0006355
Lan1g0490 371 MobiDBLite consensus disorder prediction 52 66 - -
Lan1g0490 371 SMART brlzneu 228 287 IPR004827 GO:0003700|GO:0006355
Lan1g0490 371 PANTHER - 1 359 - -
Lan1g0490 371 CDD bZIP_plant_RF2 230 278 IPR044759 GO:0003700|GO:0006355
Lan1g0490 371 MobiDBLite consensus disorder prediction 210 237 - -
Lan1g0490 371 Gene3D - 232 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0490 Lan-Chr1 5570807 5575153 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g0490 22 302 bZIP Transcription Factor Family AT2G42380 29.293 3.78e-21 90.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0490 - - gmx:100813098 556.984
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0566 12 12429258 12434793 Lan1g0490 1 5570807 5575153 LSH
Lan1g1791 1 32604026 32608808 Lan1g0490 1 5570807 5575153 LSH