Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0486 ATGGATGGTAATGGTGACATTTCTCATAAGTCTCAAAAGAAGGAATCTGAGAATAAGGATTCAGTTTTCATACATGGTGATTTGGATCTGATAATAATAGAAGCAAAATCTCTTCCAAATTTGGATTTATCTTCTGAGACATTCAGAAAATGCATCACAATGGGAAACATTTGCACCCCTCCTTTTGTAAAAGGACTTAAGACCCATTCAGGGAATCATAAGATGATAACAAGTGACCCTTATGTCTCTATTTGCCTAGGAGGTGCAACAATAGCTCAAACAAGAGTGATTCCTAATTGTGAAAATCCTATGTGGGATGAACATTTTCTTGTACCAGTTGCACACCCTGCTACAAAATTGGAGTTTCTTGTCAAAGACGACGATGTTCTTGGCGCTGAACTAATCGGAGTAGTGGATATACCTGCTCAAAAGATTTTATCAGGGAACCTTATAAATGATTGGTTTCCAATTATTGGCCAATATGGAAACTGCTTAAAACCTTATCCTGAGTTGCATATTTCTGTTCAGTTTAGGCCTATTGGAGTTAATAACGACCCTTCCGAAAATGGAGGGGATGTGACAGCTCCTTTAGGGGTTCCTAGAACATATTTTCCTCTTAGGAAAGGAGGGAATGTGACCCTATATCAAGATGCACATGTACCAGATGGTATGCTACCTGAGATTCCATTAGAGGATGGAAAAGTGTTTCATCAAGGTAAGTGTTGGGAAGATATATGCCATGCAATTTTGGAAGCTCATCACTTAATATATGTTATAGGATGGTCAATTTATCACCCTGTTAAGCTTGTTAGAGAGCCAACAAAACCATTGCCATCTGGTGGAGAACTTACACTTGGAGAGCTTTTGAAGTACAAGTCACAAGAAGGGGTTCGCGTCGTTATGCTGATTTGGGATGACAGAACCTCACATGACAAATTTCTTATCAAAACAGATGGAGTCATGCAGACACATGATGAACAAACTAAGAAGTATTTCAAACACTCAACCGTTCATTGTGTCCTATCTCCACGTTACGCAAGCAATAAGCTCAGCATTTTCAAGCAACAGGTTGTAGGAACCCTCTTTACACATCACCAGAAATGTGTGATTTTGGACACTCAAGCATCTGGGAATAACAGGAAAATAACTGCTTTTATTGGTGGTTTGGATCTATGTGATGGCAGATATGACACACCTCAACATCGGCTTTTCGTTGATCTAGATACTGTCTTTCACAATGATTATCATAATCCTACATTTCAAATAAGTTCATATGGACCAAGGCAACCATGGCATGATTTACACTGCAAAGTTGAAGGTCCAGCTGCATATGATATATTGACCAATTTTGAGCAAAGATGGAGGAAAGCCAAAAAATGGCGCGACTTTAGGCTAAAAAAGGTGACAAATTGGCATGACGATGCTTTGTTAAGGCTCGACCGAATTTCATGGATTCTCAGTCCATCTAGTGGTCTTCATGGTGATAAATCTGTTCATGTAACTGATGAAAATGATCCTGAGAATTGGCATGTGCAGGTATTTCGGTCCATAGATTCAGGATCTGTGAAGGGTTTTCCAAAGGATTTTGACAAAGCTAAGGCTGAGAACCTTTTATGTGGAAAAAATTTGAAAGTAGATCAAAGTATCCATGCTGCTTATGTAAAGGCAATAAGATCAGCTCAACACTTCATATATATTGAGAATCAGTATTTTCTTGGTTCATCATATCATTGGCCTTCATATAAAAATGCAGGTGCAAATCACTTGGTTCCGATGGAGCTCGCATTGAAAATCACTAGCAAGATCACGGCGAAAGAGCGTTTTTGTGTGTACATAGTTATACCAATGTGGCCAGAGGGGGTTCCAACTAGTGCTGCTGTTCAAGAAATCTTGTTCTGGCAGGGACAAACAATGTCTATGATGTACAGAATTATTGCAGATGCCCTCTTCAAAGAAGGTCTCTCCAATAAGTATCATCCTCGAGATTATCTCAATTTTTACTGCCTTGGAAGGAGAGAACAAGGATCCTCAGAAAATTCATCATCGCCGAAATCGAATCAGTCATCAGAACACCGGGCTTTGGCATCAGTTAGAAAATTCAGACGTTTTATGATTTATGTTCATGCTAAGGGAATGATAGTTGATGATGAATATGTGATAATGGGATCTGCTAATATAAACCAAAGATCAATGGATGGTTCAAGAGACACAGAAATAGCTATGGGTGCATATCAACCAAAATATACATGGACAGAAAAGAATTCTCATCCATATGGCCAGGTATATGGATACAGAATGTCTCTATGGGCTGAACACCTAGGTAGACTTGATGACACTTTTTCTGAACCTCACAGCTTGGAATGTGTTAGACATGTCAACAACATTGCCAAAAGAAACTGGACCACATTTGTGTCTGATGAAGGGAATCAAATGAGTGGACACTTGATGCAGTATCCAGTTCATGTAAGCAGAGATGGAAAAGTCAGTGCGCTAAATGATTATGAGTTCTTTCCTGATGTTGGTGGTAAAATTCTTGGTTCACCTAATTCTCTTCCAGATGCACTAACAACATGA 2574 0.3912 MDGNGDISHKSQKKESENKDSVFIHGDLDLIIIEAKSLPNLDLSSETFRKCITMGNICTPPFVKGLKTHSGNHKMITSDPYVSICLGGATIAQTRVIPNCENPMWDEHFLVPVAHPATKLEFLVKDDDVLGAELIGVVDIPAQKILSGNLINDWFPIIGQYGNCLKPYPELHISVQFRPIGVNNDPSENGGDVTAPLGVPRTYFPLRKGGNVTLYQDAHVPDGMLPEIPLEDGKVFHQGKCWEDICHAILEAHHLIYVIGWSIYHPVKLVREPTKPLPSGGELTLGELLKYKSQEGVRVVMLIWDDRTSHDKFLIKTDGVMQTHDEQTKKYFKHSTVHCVLSPRYASNKLSIFKQQVVGTLFTHHQKCVILDTQASGNNRKITAFIGGLDLCDGRYDTPQHRLFVDLDTVFHNDYHNPTFQISSYGPRQPWHDLHCKVEGPAAYDILTNFEQRWRKAKKWRDFRLKKVTNWHDDALLRLDRISWILSPSSGLHGDKSVHVTDENDPENWHVQVFRSIDSGSVKGFPKDFDKAKAENLLCGKNLKVDQSIHAAYVKAIRSAQHFIYIENQYFLGSSYHWPSYKNAGANHLVPMELALKITSKITAKERFCVYIVIPMWPEGVPTSAAVQEILFWQGQTMSMMYRIIADALFKEGLSNKYHPRDYLNFYCLGRREQGSSENSSSPKSNQSSEHRALASVRKFRRFMIYVHAKGMIVDDEYVIMGSANINQRSMDGSRDTEIAMGAYQPKYTWTEKNSHPYGQVYGYRMSLWAEHLGRLDDTFSEPHSLECVRHVNNIAKRNWTTFVSDEGNQMSGHLMQYPVHVSRDGKVSALNDYEFFPDVGGKILGSPNSLPDALTT* 858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0486 857 Pfam PLD-like domain 555 739 IPR025202 -
Lan1g0486 857 Gene3D Endonuclease Chain A 501 754 - -
Lan1g0486 857 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 360 395 IPR001736 GO:0003824
Lan1g0486 857 Pfam Phospholipase D C terminal 777 847 IPR024632 -
Lan1g0486 857 Pfam Phospholipase D Active site motif 361 395 IPR001736 GO:0003824
Lan1g0486 857 PANTHER PHOSPHOLIPASE D 18 857 IPR015679 -
Lan1g0486 857 PANTHER PHOSPHOLIPASE D 18 857 - -
Lan1g0486 857 PIRSF PLD_plant 12 857 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Lan1g0486 857 Gene3D Endonuclease Chain A 232 475 - -
Lan1g0486 857 Gene3D C2 domain 7 180 IPR035892 -
Lan1g0486 857 SMART pld_4 360 395 IPR001736 GO:0003824
Lan1g0486 857 SMART pld_4 703 730 IPR001736 GO:0003824
Lan1g0486 857 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 703 730 IPR001736 GO:0003824
Lan1g0486 857 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 24 179 IPR035892 -
Lan1g0486 857 SMART C2_3c 27 154 IPR000008 -
Lan1g0486 857 Pfam C2 domain 26 157 IPR000008 -
Lan1g0486 857 ProSiteProfiles C2 domain profile. 7 155 IPR000008 -
Lan1g0486 857 SUPERFAMILY Phospholipase D/nuclease 547 788 - -
Lan1g0486 857 CDD C2_plant_PLD 22 178 - -
Lan1g0486 857 SUPERFAMILY Phospholipase D/nuclease 200 462 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0486 Lan-Chr1 5555217 5561364 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g0486 22 856 Phospholipase D Gene Family (Wang group) AT2G42010 54.640 0.0 931
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0486 K01115 - gmx:100779740 1489.94