Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0466 TTACTTATGCAGATTCCACTTCATAAGCGTCTTGATGCTGTTGTTACTCTCTGCTATGAAGCTCTTTCTAGGGCTACAGACCCTATTTATGGCTGTGTTGCTCACATCTTTGCCCTTCAGCAACAGGTTGTGAACTTGCAGGCAGAGTTAAACTATGTTCATGCCCATCTTGCCACAATGCATAGTCTCCAAATAGCTCATCTTTCTCACCCTCAAATCTCTTCTTCACCAACAAGTTTCCCTTCATCTTCAAATGCTCATGACAACATATCCATGCACTTTGATCCTCATCAACAACTACAATCAACATCATTAGAGTTATGCAACATTCTCAATCCATCACATCAACAACACAAGGATGGGGAATTGGAAGCTATGGCTCTTGAATTTGTCTCTAGGTACTTGCCTGGAGTACGATTCAAGCCACCACATTCTCACTAA 441 0.4172 LLMQIPLHKRLDAVVTLCYEALSRATDPIYGCVAHIFALQQQVVNLQAELNYVHAHLATMHSLQIAHLSHPQISSSPTSFPSSSNAHDNISMHFDPHQQLQSTSLELCNILNPSHQQHKDGELEAMALEFVSRYLPGVRFKPPHSH* 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0466 146 PANTHER LOB DOMAIN-CONTAINING PROTEIN 19 1 136 - -
Lan1g0466 146 ProSiteProfiles LOB domain profile. 1 57 IPR004883 -
Lan1g0466 146 Pfam Lateral organ boundaries (LOB) domain 2 54 IPR004883 -
Lan1g0466 146 PANTHER LOB DOMAIN CONTAINING PROTEIN 1 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0466 Lan-Chr1 4076669 4087038 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g0466 1 142 AS2 family AT4G00210 39.752 1.42e-31 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lan1g0466 LOB 2.1e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0466 - - lang:109340993 296.204