Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0465 ATGGATCCTGTAACAGCACAAGGACGTCCTCTACCACCTCCTTTCTTGAGTAGAGATCTTCATCTACACTCTCACCATCAATTCCAACACCACAACAACCAAAACAGTGAAGATGAACAAAGTGGCAATGGCAATTTAGGTCGTGGGCAGAAGCGAGATCGAGACGAAAACGCCGGCGCCACCACTCCTACCAACGCTTCCGCTGTTGCTGCGGCAGAAGGCAAGGAGCCAGGCTCAGGGACAAGTGGAGGAGAAGGTAGTGAGATGGGTAGAAGACCAAGAGGAAGACCTGCAGGTTCAAAGAACAAGCCTAAGCCACCAATCATTATCACTAGGGACAGTGCCAATGCCCTAAGATCTCATGTCATGGAAATCGCTAATGGATGTGACATAATGGAGAGTGTTACCAATTTCGCACGGAGGAGGCAGCGTGGTATCTGTATCCTCAGTGCGAGTGGTACTGTCACCAATGTCACCCTTAGGCAACCAGCTTCGCCGGGTGCAGTTGTTACCTTACATGGAAGATTTGAGATCCTGTCCTTGTCCGGATCTTTTTTGCCACCCCCGGCGCCTCCTGCTGCGTCGGGATTGGCAATATATCTTGCTGGAGGACAAGGACAGGTAGTTGGTGGGAGTGTTGTGGGTCCACTTCAAGCTTCAGGCCCAGTGGTCATAATGGCTGCTTCCTTTGGTAATGCTGCTTATGAGAGGCTGCCCTTAGAAGAGGAGGAAACTCCTGTGGCGGTTCCGGGGAGCGGAGGGTTAGGTTCACCAGGGATTGTGGGTCAACAGCAACAGCAGCAGCAACAACAACTTGTTTTGGATCCTAACAATTCACTATTCCATGGAGTGCCTCAAAATCTTATGAATTCATGTCAATTACCAGCTGAGGGTTATTGGGGTGGTTCTGCTCGCCCTCCATTTCAGTAA 930 0.5054 MDPVTAQGRPLPPPFLSRDLHLHSHHQFQHHNNQNSEDEQSGNGNLGRGQKRDRDENAGATTPTNASAVAAAEGKEPGSGTSGGEGSEMGRRPRGRPAGSKNKPKPPIIITRDSANALRSHVMEIANGCDIMESVTNFARRRQRGICILSASGTVTNVTLRQPASPGAVVTLHGRFEILSLSGSFLPPPAPPAASGLAIYLAGGQGQVVGGSVVGPLQASGPVVIMAASFGNAAYERLPLEEEETPVAVPGSGGLGSPGIVGQQQQQQQQQLVLDPNNSLFHGVPQNLMNSCQLPAEGYWGGSARPPFQ* 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0465 309 MobiDBLite consensus disorder prediction 244 268 - -
Lan1g0465 309 ProSiteProfiles PPC domain profile profile. 115 251 IPR005175 -
Lan1g0465 309 CDD DUF296 119 186 IPR005175 -
Lan1g0465 309 Gene3D - 118 247 - -
Lan1g0465 309 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 4 308 IPR014476 GO:0003680
Lan1g0465 309 PIRSF ESCAROLA 16 308 IPR014476 GO:0003680
Lan1g0465 309 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 18 4 308 - -
Lan1g0465 309 Pfam Plants and Prokaryotes Conserved (PCC) domain 119 231 IPR005175 -
Lan1g0465 309 MobiDBLite consensus disorder prediction 1 108 - -
Lan1g0465 309 SUPERFAMILY AF0104/ALDC/Ptd012-like 115 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0465 Lan-Chr1 3940748 3942389 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g0465 1 308 AT-hook Motif Nuclear Localized (AHL) Family AT2G45430 64.308 6.56e-89 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0465 - - gmx:100816243 413.305