Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0454 ATGGAAGAGGTTGGAGTCTCCAAATTGAAATCACTTGGCCAAATTGCAAAGATAAAAGAAATGTTTCAGAAGTGGCAAACAACTCCCCTAGGCTCAAAAGAATCCAATGACCACTCTCATGTGAAACATGGGGGAATTTCACCAATGATTAACAAAAGGCTAACAAATCTTGTGTATTGTGACTCTGATGAGGAAGGCTGCTACAGCCCCGAACCGCCGCATGATGTTCCGAAAGGATATTTGGCAGTCTATGTTGGACCGGAGCATCGAAGGTTCATCGTTCCTACGAGCTACCTTAGCCATTCTTTGTTCAAAGTGTTGCTGGAAAAGGCTGCAGAGGAGTTTGGGTTTGACCAGAGTGGTGGACTCACAATACCATGTGAGATTGAAACATTTAAGTACCTTCTGAATTGCATGGAGAACAATCAGAAAGATGATCATGATGAAATTTGTGGAAACACAGGAACCATAGAAGAGTAA 480 0.425 MEEVGVSKLKSLGQIAKIKEMFQKWQTTPLGSKESNDHSHVKHGGISPMINKRLTNLVYCDSDEEGCYSPEPPHDVPKGYLAVYVGPEHRRFIVPTSYLSHSLFKVLLEKAAEEFGFDQSGGLTIPCEIETFKYLLNCMENNQKDDHDEICGNTGTIEE* 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0454 159 Pfam Auxin responsive protein 67 138 IPR003676 GO:0009733
Lan1g0454 159 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 10 158 IPR003676 GO:0009733
Lan1g0454 159 PANTHER SMALL AUXIN-UP RNA-RELATED 10 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0454 Lan-Chr1 3699717 3701699 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g0454 1 147 Calmodulin-binding Proteins AT5G20810 67.333 1.84e-66 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0454 K14488 - gmx:100795275 258.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan1g0454 1 3699717 3701699 Lan1g0454 1 3699717 3701699 ECH
Lan12g0952 12 16381886 16383834 Lan1g0454 1 3699717 3701699 LSH
Lan1g0454 1 3699717 3701699 Lan15g0194 15 2116625 2119339 PCT
Lan1g0454 1 3699717 3701699 Lan14g0095 14 1277970 1281181 PCT
Lan15g0194 15 2116625 2119339 Lan1g0454 1 3699717 3701699 PCT
Lan14g0095 14 1277970 1281181 Lan1g0454 1 3699717 3701699 PCT