Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0435 ATGACTGTGATGAAAATCACATGGAAATCTATGTTTCCAAGTTGTTTTAAAGGTGATGATGATTACCATTCACCAAAACCCAATAATAAAGTTGTGGCTTCACCTCCAAAGACAACAAAGCCTGAAGGTTCTTTAAACAGGATCTCTGTGACTGATTTGAGTTTTCCAAGCACAACACTTTCAGAAGATTTGTCCATTTCTCTAGCAGGGTCTAACCTGCATGTTTTCACACTTGCTGAGCTCAAGATTATAACACAGGGCTTCTCTTCAAGTAACTTTTTAGGAGAAGGAGGATTTGGACCTGTGCATAAAGGGTTCATTGATGATAAGCTTAGGCCTGGTCTTAAGGCTCAAACTGTTGCTGTAAAGCTTTTAGACTTGGATGGATCTCAGGGTCACAGAGAGTGGTTGACTGAAGTTGTGTTTCTGGGTCAATTAAGACATCCACACCTTGTGAAATTGATTGGATATTGCTGTGAAGAGGAACATAGGCTTTTGGTATATGAATATTTACCAAGAGGGAGCTTAGAGAATCAACTTTTTAGAAGATATTCAGCTTCATTACCATGGTCTGCAAGAATGAAAATAGCTGTTGGAGCTGCAAAGGGTCTAGCTTTTTTACACGAGGCACAGAAACCAGTCATCTATAGAGATTTCAAAGCTTCAAACATATTGTTAGACTCTGATTATGGTGCAAAACTCTCAGATTTTGGCTTAGCAAAAGATGGTCCTGAAGGAGATGATACTCATGTTTCAACAAGAGTTATGGGCACACAAGGTTATGCTGCCCCTGAATATGTCATGACAGGTCATTTGACAGCAATGAGTGATGTGTATAGCTTTGGAGTGGTCCTAATGGAGCTACTAACAGGTAGAAGATCAGTGGAAAAGGGTCGTCCACAAAGAGAACAGAACCTAGTGGAATGGTCCAGGCCATACTTAAATGATTCAAGGAAACTTAGCAGAATAATGGATCCAAGGCTTGAGGGTCAATATTCAGAGATAGGAGCCAAAAAAGCTGCAGCATTGGCTTATCTATGCCTCAGTCATAGGCCAAGGAGTAGGCCAACAATGACCACAGTTGTTAAGACTCTTGAGCCACTTCAAGACTTTGATGATATTCCAATTGGTCCATTTGTTTACACAGTTCCAAGTGATAATGGTGAAGGGAATAAAGATGCAAAAGAAAGTGATACACCTAAGGAGAAGAAGAGAGAAAATGGTGGTCATAACCACCACCACCACCACCGGAGTCACCACCGCAGTAATGGGCATAGGCATCATCCTCTTAAATCACCTAAGACACCAAACTCAATGTCACAGAGTGATAAAAACCAGAATGGTAGAAGTGTATCAACCTCACCTGATACATCCATTGCATCAGAAAGCCAAGGAAGCAAAGTTTAG 1407 0.4087 MTVMKITWKSMFPSCFKGDDDYHSPKPNNKVVASPPKTTKPEGSLNRISVTDLSFPSTTLSEDLSISLAGSNLHVFTLAELKIITQGFSSSNFLGEGGFGPVHKGFIDDKLRPGLKAQTVAVKLLDLDGSQGHREWLTEVVFLGQLRHPHLVKLIGYCCEEEHRLLVYEYLPRGSLENQLFRRYSASLPWSARMKIAVGAAKGLAFLHEAQKPVIYRDFKASNILLDSDYGAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHLTAMSDVYSFGVVLMELLTGRRSVEKGRPQREQNLVEWSRPYLNDSRKLSRIMDPRLEGQYSEIGAKKAAALAYLCLSHRPRSRPTMTTVVKTLEPLQDFDDIPIGPFVYTVPSDNGEGNKDAKESDTPKEKKRENGGHNHHHHHRSHHRSNGHRHHPLKSPKTPNSMSQSDKNQNGRSVSTSPDTSIASESQGSKV* 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0435 468 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 35 422 - -
Lan1g0435 468 SUPERFAMILY Protein kinase-like (PK-like) 64 366 IPR011009 -
Lan1g0435 468 Gene3D Transferase(Phosphotransferase) domain 1 171 374 - -
Lan1g0435 468 PANTHER OS01G0588500 PROTEIN-RELATED 35 422 - -
Lan1g0435 468 MobiDBLite consensus disorder prediction 379 468 - -
Lan1g0435 468 Gene3D Phosphorylase Kinase; domain 1 53 170 - -
Lan1g0435 468 MobiDBLite consensus disorder prediction 433 468 - -
Lan1g0435 468 MobiDBLite consensus disorder prediction 407 432 - -
Lan1g0435 468 Pfam Protein tyrosine and serine/threonine kinase 92 365 IPR001245 GO:0004672|GO:0006468
Lan1g0435 468 ProSiteProfiles Protein kinase domain profile. 88 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan1g0435 468 ProSitePatterns Serine/Threonine protein kinases active-site signature. 214 226 IPR008271 GO:0004672|GO:0006468
Lan1g0435 468 MobiDBLite consensus disorder prediction 389 406 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0435 Lan-Chr1 3488134 3490181 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g0435 74 365 Glycoside Hydrolase AT3G07070 51.186 2.20e-98 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lan1g0435 PK_Tyr_Ser-Thr 1.7e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0435 - - gmx:100305397 718.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan1g0435 1 3488134 3490181 Lan1g0435 1 3488134 3490181 ECH
Lan12g0968 12 16501806 16504000 Lan1g0435 1 3488134 3490181 LSH
Lan1g1304 1 22750971 22774766 Lan1g0435 1 3488134 3490181 LSH
Lan1g0435 1 3488134 3490181 Lan15g0179 15 1913069 1915500 PCT
Lan15g0179 15 1913069 1915500 Lan1g0435 1 3488134 3490181 PCT