Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0430 ATGGCAGACCCTGCAGCCATGTACAACTTCCTGAAACAACCCTCTTCTGATTCGAAACAAGGCACTGCAACAAAACCACTCCACCACCCATCTTCTAATTCTTCCATCCGCACCTTCCCATGCAATTTCTGCCATCGCAAGTTCTACACTTCTCAAGCTCTCGGTGGCCACCAAAATGCTCATAAGCTTGAGAGAGCTGCTGCTAGGAGAACCAACAATCTATCATTCACACAAAACCATGTTGCTGCTTCTACATTACCACCATTTCCACCTTCTTTGGATTTGAACACTTCTACTTTTCAACCTTATGCTCATTTCTTTGGTGGTCACCCTTATTGGCTTGAAATGGAACAACAACCTTTTCAGTTTCAGACCCATCATCAGCATGTTGCACCAAACAACAATGTTCCTGTTTCTTACCATGTTGCTGCTTCTACTTCTTCAACTTCTACCCATAATGTTTCTGCATCTGATGCTTCTGATCATGTTAACCTTGACCTCACTCTTCGCTTGTGA 516 0.436 MADPAAMYNFLKQPSSDSKQGTATKPLHHPSSNSSIRTFPCNFCHRKFYTSQALGGHQNAHKLERAAARRTNNLSFTQNHVAASTLPPFPPSLDLNTSTFQPYAHFFGGHPYWLEMEQQPFQFQTHHQHVAPNNNVPVSYHVAASTSSTSTHNVSASDASDHVNLDLTLRL* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0430 171 Gene3D Classic Zinc Finger 14 85 - -
Lan1g0430 171 SUPERFAMILY beta-beta-alpha zinc fingers 37 66 IPR036236 -
Lan1g0430 171 ProSiteProfiles Zinc finger C2H2 type domain profile. 39 66 IPR013087 -
Lan1g0430 171 ProSitePatterns Zinc finger C2H2 type domain signature. 41 61 IPR013087 -
Lan1g0430 171 PANTHER OS02G0182300 PROTEIN 20 171 - -
Lan1g0430 171 PANTHER ZINC FINGER PROTEIN JAGGED 20 171 IPR045320 GO:0003700
Lan1g0430 171 MobiDBLite consensus disorder prediction 11 33 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0430 Lan-Chr1 3457817 3458332 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g0430 29 125 C2H2 Transcription Factor Family AT5G14010 49.485 2.29e-18 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0430 - - lang:109330395 340.117