Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0427 ATGATGAATGGAAGGAACAGTTTCCCTTTTACTCCATCTCAGTGGCAAGAACTTGAACATCAAGCTCTTATTTACAAGCACATGGCTTCAGGTGTTTCCATTCCACCTGATCTAATCTTCACCATCAAAAGAAGCTACTTGGATTCTCCTCTTTCTTCAAGGCTTTTGCCTCACCAGCCTCAACACTTTGGGTGGAACTACTTGCAAATGGGTTTGGGAAGAAAAATAGACCCAGAGCCAGGTAGGTGCAGAAGAACAGATGGGAAAAAATGGAGGTGCTCAAAAGAGGCCTACCCAGATTCGAAGTATTGTGAAAGGCACATGCATAGAGGCAAAAACCGTTCAAGAAAGCCTGTGGAAGTTTTGAAAACAACAAATGACACTAATGCTTCTTCAACTTCAACAACAACAACACCCTCCTCAATCTTATCAATCACCAAAAACAACACTGCACTAACCCCAACAACTACTCATGACTCTTACCACCATCACCCTCATCCTCAGCAACACTCTTTCCTCTACCATCATCCACCACCTTCAAGACCCTCTTCTAATGGTTTGTCTTTTCAAGACAATAACAGTGCTTCCATGTTTCTTGATAATGCTTCTTGCTCTCAAAACAATGAATCCAGGAATAGGTATATTTATGGACTGAAAGAAGAGGTTGATGAGCATGCTTTCTTCACTGAACCTTCTGGGAATATGAGAAGCTTCTCTGCTTCATCTATGGATGATTCTTGGAACCTAACACCACTCACTATAAGTTCCTCATCCTCTTCAAAACAGAGGAACTTCTCTGGTTTAACAAATGACAATGAGTACTCTTACTTGCAACTTCAGAGCCTCAGTGACAATGCAAAACAACAATCTGAGCAAGATCAGGGTTGCTATAATGATATGAAGTGTGAAAATATCATGAAACTTGGTGACAGAGAAGAACAACAACCTCAGCAGAAGACTGTTCATCGTTTCTTTGATGAATGGCCTCCCAAAAGAAGAGGCTTGTGGCTTGATTTGGATGATAAATCTTCAACAACTCAACTTTCAATCTCCATTCCAACTTCTAATGATTTTGCAAATTTCAGTTCCAGAAACCAACGAGATGATTGA 1110 0.4063 MMNGRNSFPFTPSQWQELEHQALIYKHMASGVSIPPDLIFTIKRSYLDSPLSSRLLPHQPQHFGWNYLQMGLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVEVLKTTNDTNASSTSTTTTPSSILSITKNNTALTPTTTHDSYHHHPHPQQHSFLYHHPPPSRPSSNGLSFQDNNSASMFLDNASCSQNNESRNRYIYGLKEEVDEHAFFTEPSGNMRSFSASSMDDSWNLTPLTISSSSSSKQRNFSGLTNDNEYSYLQLQSLSDNAKQQSEQDQGCYNDMKCENIMKLGDREEQQPQQKTVHRFFDEWPPKRRGLWLDLDDKSSTTQLSISIPTSNDFANFSSRNQRDD* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0427 369 PANTHER GROWTH-REGULATING FACTOR 6 3 356 - -
Lan1g0427 369 Pfam QLQ 9 42 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lan1g0427 369 ProSiteProfiles WRC domain profile. 77 121 IPR014977 -
Lan1g0427 369 SMART QLQ_2 8 44 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lan1g0427 369 ProSiteProfiles QLQ domain profile. 9 44 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lan1g0427 369 MobiDBLite consensus disorder prediction 122 158 - -
Lan1g0427 369 Pfam WRC 78 120 IPR014977 -
Lan1g0427 369 MobiDBLite consensus disorder prediction 108 192 - -
Lan1g0427 369 PANTHER - 3 356 IPR031137 GO:0005634|GO:0006351|GO:0032502
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0427 Lan-Chr1 3424527 3426958 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g0427 9 120 GRF Transcription Factor Family AT3G13960 74.107 2.97e-56 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Lan1g0427 WRC 7.8e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0427 - - gmx:100783524 507.294
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan1g0427 1 3424527 3426958 Lan1g0427 1 3424527 3426958 ECH
Lan12g0977 12 16550559 16552902 Lan1g0427 1 3424527 3426958 LSH
Lan1g0427 1 3424527 3426958 Lan15g0173 15 1852670 1855822 PCT
Lan15g0173 15 1852670 1855822 Lan1g0427 1 3424527 3426958 PCT