Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0423 ATGCTTATGTGCATAACTCGTCCTAAGAAACTAGGAAATGACTCAGTGAGTCAGCCTGACGATTCCAGTGGAAATGCCGCCAAAAACCATGGCGTCAAATCCCTCGCTTCTCAGATAAAGGATATGGCGTTGAAAGCATCGGGTGCGTACAAGTACTGCGCGACTTGCACGGGGCCACCGGCGCACGGTGGTGGAATAAGTAGCAACACCGAATCGGACGTGGAGTCGGAACGGTTCGGTCGGTCGTACGGGAGAACAGGGAGTTCGAGCTCGACGAGAACATGGGGGAAGGAAATGGAGGCAAGACTGAAGGGGATATCGAGCGGGGAAGGAACACCGAACTCCGGCAGTGAACAGCGGAGGGAGCCGGTGGTTCTGTTCGTGGAAGAGAACGAACCGAAGGAGTGGGTGGCGCAAGTGGAACCTGGCGTTTTGATCACGTTGGTGTCGCTTCCACGTGGCGGGAACGATCTTAAGCGTATACGGTTCAGTCGCGAGATGTTTAACAAATGGGAAGCTCAAAAGTGGTGGTCAGAGAACTGTGACAAGGTCATGGAACTTTACAATGTTCAAAGGCTTAACCACCATGCCTTCCCTCTTCCAACACCACCAAGGTCTGAAGATAAGAACTCAAAGCTTGAATCAGCAGAAGCCAGCCCTATAACACGTCCACTGACCAAGGAACAGATGCCTCGTACTATGTCCCATCCAACAGGGACGGGAATGGGATATTCATCTTTGGATTCTTTTGATCATCAATCAATGCAATCCCAGCATTTCATTGACTCGGCTACTGGCATGAGCTCAACCCCAAAAGTCTCTACCATTAGTACGGCCAAGACAGAGTTATCATCAGTTGATGCTTCAATCATAAGTAGCTCATCCAGAGATGCTGATCGCTCGAGTGACCTATCAATGAGCAATGCTAGTGATTTGGAGACTGAATGGGTTGAGAAGGATGGACCTGGGGTTTACATTACTATTAGAGCATTGCAAGGTGGCAAAAGGGAGTTCAGACGTGTCAGGTTCAGCCGAGAAAAATTTGGGGAGGTGCATGCTAGATTATGGTGGAAGGAGAACCGTGCCAGAATACATGAACAATACTTGTGA 1110 0.4964 MLMCITRPKKLGNDSVSQPDDSSGNAAKNHGVKSLASQIKDMALKASGAYKYCATCTGPPAHGGGISSNTESDVESERFGRSYGRTGSSSSTRTWGKEMEARLKGISSGEGTPNSGSEQRREPVVLFVEENEPKEWVAQVEPGVLITLVSLPRGGNDLKRIRFSREMFNKWEAQKWWSENCDKVMELYNVQRLNHHAFPLPTPPRSEDKNSKLESAEASPITRPLTKEQMPRTMSHPTGTGMGYSSLDSFDHQSMQSQHFIDSATGMSSTPKVSTISTAKTELSSVDASIISSSSRDADRSSDLSMSNASDLETEWVEKDGPGVYITIRALQGGKREFRRVRFSREKFGEVHARLWWKENRARIHEQYL* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0423 369 ProSiteProfiles BRX domain profile. 134 189 IPR013591 -
Lan1g0423 369 ProSiteProfiles BRX domain profile. 314 369 IPR013591 -
Lan1g0423 369 Pfam Transcription factor regulating root and shoot growth via Pin3 134 188 IPR013591 -
Lan1g0423 369 Pfam Transcription factor regulating root and shoot growth via Pin3 313 368 IPR013591 -
Lan1g0423 369 MobiDBLite consensus disorder prediction 288 311 - -
Lan1g0423 369 MobiDBLite consensus disorder prediction 61 97 - -
Lan1g0423 369 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 369 IPR044532 -
Lan1g0423 369 MobiDBLite consensus disorder prediction 11 32 - -
Lan1g0423 369 MobiDBLite consensus disorder prediction 226 249 - -
Lan1g0423 369 MobiDBLite consensus disorder prediction 1 32 - -
Lan1g0423 369 MobiDBLite consensus disorder prediction 199 249 - -
Lan1g0423 369 Pfam Transcription factor BRX N-terminal domain 25 56 IPR027988 -
Lan1g0423 369 PANTHER PROTEIN BREVIS RADIX-LIKE 4 1 369 - -
Lan1g0423 369 MobiDBLite consensus disorder prediction 82 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0423 Lan-Chr1 3390637 3397075 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g0423 1 369 Major Intrinsic Protein MIP AT1G31880 42.078 2.49e-80 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0423 - - gmx:100794109 536.184
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0983 12 16585758 16590874 Lan1g0423 1 3390637 3397075 LSH
Lan1g1291 1 22654028 22658415 Lan1g0423 1 3390637 3397075 LSH
Lan1g0423 1 3390637 3397075 Lan14g0122 14 1519395 1525312 PCT
Lan14g0122 14 1519395 1525312 Lan1g0423 1 3390637 3397075 PCT