Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0418 ATGTCTGCTCCAGTGAACATCATTGTAGGTTCTCATGTCTGGCTTGAGGATCCAGTCCAAGCCTGGGTTGGTGGAGAAGTGTCTAAAATCAATGGTGTTGAAGTCCACGTTTCCACCACAGATGGGAAAACACTTATAAAAAATATCTCAAAAGTTTTCCCCAAGGATAATGAAGCCCCTCCTGGAGGTGTTGATGACATGACAAAACTGTCATACTTGCATGAACCAGGAGTTCTGCACAACTTGGCTACTAGATATGAACTCAATGAAATTTATACATATACTGGAAATATCCTGATCGCAATAAACCCATTTCAAAGGTTGCCACATCTATACGATACTCACATGATGGTGCAGTACAAAGGAGCTGGTTTTGGAGAGTTGAGTCCTCATGTTTTTGCAATTGCAGATGTTGCTTACAGGGCAATGATCAACGAGGGAAAAAGCAATTCAATCTTGGTTAGCGGTGAGAGTGGGGCTGGGAAGACAGAAACAACAAAAATGCTCATGCAATATCTTGCATATCTTGGGGGTCGTTCTGGAGTAGAAGGAAGGACAGTTGAACAGCAAGTTTTAGAATCTAATCCAGTTCTTGAAGCATTTGGTAATGCCAAAACAATCAGAAATAATAATTCAAGTCGTTTTGGTAAATTTGTTGAGATACAATTTGACAACAAGGGAAGGATCTCTGGGGCAGCTATAAGAACGTATTTGTTAGAGAGGTCTCGTGTTTGTCAAATTTCAGATCCGGAAAGAAATTACCATTGTTTTTATTTTCTTTGTGCTGCACCAGCTGAGGAAAAAGAGAAGTATAAGTTGGGAAGTCCTAGTTCCTTCCATTACTTAAATCAGTCCAAGTGCTATGAGCTGGATGGAGTGGATGATGCACGTGAATATCTTGCCACTCGAAGAGCCATGGATGTTGTTGGAATTAGGGAGGAAGAGCAGGAGGCTATTTTTCGGGTTGTTGCAGCAATTTTGCACCTTGGGAACATTGAATTTGCAAAAGGAGAGGAAATTGATTCTTCTGTCATCAAAGATGAGAAGTCTAGATTCCATCTTAATGTGACCGCTGAACTTCTTAAGTGCAACTGTACGAGCTTGGAAGACGTGCTGATCAAGCGTGTGATGGTAACACCTGAGGAGGTTATTACAAGAACTCTTGATCCTGATGCAGCTCTTGGTAGCAGGGATGCATTAGCTAAAACCATTTATTCACGTTTGTTTGATTGGCTTGTGGAGAAGATCAACAATTCAATTGGGCAAGATCCAAATTCAAAATCTATCATTGGAGTTCTCGATATCTATGGGTTTGAAAGTTTTAAGTTCAATAGTTTTGAGCAGTTCTGTATTAATTTTACAAATGAGAAGTTGCAACAACATTTTAATCAGCATGTCTTTAAAATGGAACAAGAAGAATACACCAAAGAAGAAATTGATTGGAGTTACATAGAGTTCATTGACAACCAAGATGTTTTGGATCTCATTGAGAAGAAACCTGGAGGAATAATTTCACTTCTTGATGAAGCTTGTATGTTTCCTAAGTCTACACATGAAACATTTTCTCAGAAGTTGTACCAGACATTCAAAAACAACAAACGCTTTATCAAACCTAAACTTTCTCGGACTAGTTTTACGATATCTCATTATGCAGGGGAGGTGACATATTTGGCTGATTTGTTTCTTGACAAAAACAAGGACTATGTAGTCGCAGAACATCAAGATCTACTGACAGCCTCAAAATGCTCATTTGCGGCGAGTCTATTCCCTCCTTCTCCAGACGAGTCTTCAAAATCATCCAAGTTCTCTTCAATTGGATCTCGCTTTAAGCTACAACTTCAGTCTTTGATGGAGACTCTAAATTCAACAGAACCTCATTATATCAGATGTGTGAAGCCAAACAATGTTCTCAAGCCTGCTATTTTTGAAAATATCAACATTATGCAACAATTGCGCTGTGGTGGTGTTCTTGAGGCAATTAGAATCAGCTGTGCTGGATATCCTACCAGACGGACCTTTTATGAATTTCTTAACCGATTTGGTGTCCTTGCACCTCAAGTTCTGGATGGAAACTCTGATGACAAGGTTGCATGCCAAATGATTCTAGATAAAGTGGGTATGAAAGGCTATCAGATTGGGAAGACAAAGGTTTTCCTAAGAGCTGGCCAGATGGCTGAGCTGGATGCAAGAAGAGCAAAGGTTCTTGGAAATGCAGCTAGAATCATCCAGGGGCAAATACGTACCCATATTGCACGCAAAGAGTTCATTGAATTGCGTCAAGCTGCAATTCATGTGCAGTCTAATTTGCGAGGATTGCTATCCCGAAAGCTCTATGAGCACCTGCGACATGAAGCAGCAGCTGTAAAGATAGAAAAGAACTTCAAGCGATACATCGCCCGGAAGTCTTACGTAACAGAACGGACGTCTGCAATTATATTACAGACAGGTTTAAGGGTTATGAAGGCTCGTGATGAATTTAGATTTAGAAAGCAAACAAAGGCTGCAATTCATATCCAGGCTCGTTTGCGTCGACTATTTGCATATTTATATTTTAAAAGATTGCAAAAGGCTGCAATTTTTACTCAGTGTGGCTGGAGGAGAAGGGTTGCTAAGAGGGAACTTAGAAATCTTAAGATGGCTGCAAGAGAAACAGGCGCCCTTAAAGATGCAAAAGACAAACTCGAAAAGCGTGTTGAAGAACTTACATGGCGTTTGCAAATTGAGAAGCGTTTGAGAACTGATTTGGAAGAGGGTAAGGCACAAGAAATTTCCAAGTTACGGGATGCTTTGCATACAATGCAAAAACAAGTAGAAGAAGCAAATGGCATGGTTATCAAAGAGCGAGAGGCTGCACAAAAGACCATTGAAGAAGCAACTCCAGTTATTAAGGAGATTCCTGTTGTAATTCAAGATACTAAAAAGATTAGTTCTTTAATGGATGAAGTCAATAGTTTGAAGGAATCATTGCAATTGGAAAGAGATGCTAAAGAAGAGGCCAGGAAAGCTCAGGCCAAGGCTGAAGCTAGAAATATGGAGCTGCTTAAAAAAGTTGAAGATTCTGATCGCAAAGTAGAACAACTCCAGGAATTGGTTCAGAGATTGGAGGACAAGATTTCCAATTCGGAGTCAGAAAATCAAGTTCTTCGCCAGCAAACACTGGCTGTATCACCAACTGGAAAATCTATGTCTGTAAGACCAAGGACAGACACTTATCAGAGGATACCAGGAAACGAGAATGCTCCAGATGGTGAAACGACAACTGGAGCAGTAACAGATATGACTCTTGCTGTATCAAATGTACCTGAGCCTGAATCTGAGAGGAAACCACAAAAATCTCTCAATGAGAAGCAGCAAGAAAAACAGGACTTGTTGATCAAGTGCATAACACAAGATTTGGGATTTTCTGGAGGCAAGCCTGTTGCTGCGTGTGTCATATATAAGTGCCTTCTTCACTGGAGGTCATTTGAAGTCGAAAGAACAAGTGTCTTTGACCGAATTATTCAAACAATTGCTTCAGCTGTTGAGGCCCAGGATAGTACTGATGTATTAGCCTATTGGTTGTCTAATACATCTACTTTGTTGTTGCTACTCCAACGTACTCTCAAAGCAACTGGAGCTGCTAGCTTAACACCTCAAAGGCGGAGAACAACATCATCTTCACTATTTGGAAGAATGTCTCAAGGGATAAGAGCATCTCCCCAAAGTGCTGGGAAATCATTTCTAAATGGTCGAGGTCTTGGTAGATTGGATGGTTTACGGCAAGTGGAAGCAAAATATCCAGCACTGCTATTTAAGCAACAGCTTACTGCCTTTGTTGAAAAAATATATGGAATGATAAGAGACAACCTAAAAAAGGAGATATCTCCATTACTTGGACTGTGTATACAGGCTCCTAGGACCTCACGTCAAAGCTTAGTAAAAGGGCGGTCACATGCTAATGCAGTTGCTCAACAAGCTTTAATTGCTCACTGGCAAAGTATTGTGAAAATCTTAAGCAATTATCTAAAGATAATGAAAGCAAATTATGTGCCTCCTTTCTTGATTCGTAAAGTGTTCACTCAAATATTCTCATTCATCAATGTTCAATTATTCAACAGTCTTCTGCTGCGTCGTGAATGTTGTTCATTCAGCAATGGGGAGTACGTAAAGACAGGCTTAGCTGAATTAGAACAGTGGTATGTTGAGGCAACGGAGCAGTATACTGGCTCGGCTTCAGAGGAACTGAAACATATCAGGCAGGCTGTTGGATTCTTAGTGATACATCAAAAACCCAAAAAATCCCTGAATGAAATAACAAAGGAGTTATGTCCTGTTCTCAGTATTCAACAGTTATACAGGATTAGTACAATGTACTGGGATGACAAATATGGCACACACAGTGTATCTACAGACGTTATATCAAGCATGAGAACTATGATGTCTGAGGACTCTAATAATGCTGCCAGCACTTCTTTTCTACTGGATGATGACTCAAGCATTCCATTTTCGGTGGATGATATTTCCAAATCCATGCAAGAAGTAGAAATAGCTGAGGTAGATCCTCCTCCATTGATGCGCGAAAACTTGGGATTTGGGTTCTTACTAGCACGCTCAGAGTGA 4599 0.4031 MSAPVNIIVGSHVWLEDPVQAWVGGEVSKINGVEVHVSTTDGKTLIKNISKVFPKDNEAPPGGVDDMTKLSYLHEPGVLHNLATRYELNEIYTYTGNILIAINPFQRLPHLYDTHMMVQYKGAGFGELSPHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMQYLAYLGGRSGVEGRTVEQQVLESNPVLEAFGNAKTIRNNNSSRFGKFVEIQFDNKGRISGAAIRTYLLERSRVCQISDPERNYHCFYFLCAAPAEEKEKYKLGSPSSFHYLNQSKCYELDGVDDAREYLATRRAMDVVGIREEEQEAIFRVVAAILHLGNIEFAKGEEIDSSVIKDEKSRFHLNVTAELLKCNCTSLEDVLIKRVMVTPEEVITRTLDPDAALGSRDALAKTIYSRLFDWLVEKINNSIGQDPNSKSIIGVLDIYGFESFKFNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEIDWSYIEFIDNQDVLDLIEKKPGGIISLLDEACMFPKSTHETFSQKLYQTFKNNKRFIKPKLSRTSFTISHYAGEVTYLADLFLDKNKDYVVAEHQDLLTASKCSFAASLFPPSPDESSKSSKFSSIGSRFKLQLQSLMETLNSTEPHYIRCVKPNNVLKPAIFENINIMQQLRCGGVLEAIRISCAGYPTRRTFYEFLNRFGVLAPQVLDGNSDDKVACQMILDKVGMKGYQIGKTKVFLRAGQMAELDARRAKVLGNAARIIQGQIRTHIARKEFIELRQAAIHVQSNLRGLLSRKLYEHLRHEAAAVKIEKNFKRYIARKSYVTERTSAIILQTGLRVMKARDEFRFRKQTKAAIHIQARLRRLFAYLYFKRLQKAAIFTQCGWRRRVAKRELRNLKMAARETGALKDAKDKLEKRVEELTWRLQIEKRLRTDLEEGKAQEISKLRDALHTMQKQVEEANGMVIKEREAAQKTIEEATPVIKEIPVVIQDTKKISSLMDEVNSLKESLQLERDAKEEARKAQAKAEARNMELLKKVEDSDRKVEQLQELVQRLEDKISNSESENQVLRQQTLAVSPTGKSMSVRPRTDTYQRIPGNENAPDGETTTGAVTDMTLAVSNVPEPESERKPQKSLNEKQQEKQDLLIKCITQDLGFSGGKPVAACVIYKCLLHWRSFEVERTSVFDRIIQTIASAVEAQDSTDVLAYWLSNTSTLLLLLQRTLKATGAASLTPQRRRTTSSSLFGRMSQGIRASPQSAGKSFLNGRGLGRLDGLRQVEAKYPALLFKQQLTAFVEKIYGMIRDNLKKEISPLLGLCIQAPRTSRQSLVKGRSHANAVAQQALIAHWQSIVKILSNYLKIMKANYVPPFLIRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEYVKTGLAELEQWYVEATEQYTGSASEELKHIRQAVGFLVIHQKPKKSLNEITKELCPVLSIQQLYRISTMYWDDKYGTHSVSTDVISSMRTMMSEDSNNAASTSFLLDDDSSIPFSVDDISKSMQEVEIAEVDPPPLMRENLGFGFLLARSE* 1533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0418 1532 MobiDBLite consensus disorder prediction 1043 1087 - -
Lan1g0418 1532 Pfam DIL domain 1351 1454 IPR002710 -
Lan1g0418 1532 ProSiteProfiles IQ motif profile. 783 809 IPR000048 GO:0005515
Lan1g0418 1532 CDD MYSc_Myo11 76 720 IPR036018 -
Lan1g0418 1532 SMART DIL_2 1350 1457 IPR002710 -
Lan1g0418 1532 Gene3D - 735 785 - -
Lan1g0418 1532 Gene3D - 786 836 - -
Lan1g0418 1532 Coils Coil 923 943 - -
Lan1g0418 1532 Coils Coil 975 1051 - -
Lan1g0418 1532 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 35 785 IPR027417 -
Lan1g0418 1532 ProSiteProfiles IQ motif profile. 758 787 IPR000048 GO:0005515
Lan1g0418 1532 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 8 57 IPR004009 GO:0003774|GO:0005524|GO:0016459
Lan1g0418 1532 Pfam Myosin head (motor domain) 64 720 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lan1g0418 1532 Gene3D Kinesin motor domain 65 662 IPR036961 -
Lan1g0418 1532 Gene3D - 439 623 - -
Lan1g0418 1532 ProSiteProfiles Dilute domain profile. 1164 1475 IPR002710 -
Lan1g0418 1532 ProSiteProfiles Myosin motor domain profile. 62 732 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lan1g0418 1532 SMART iq_5 782 804 IPR000048 GO:0005515
Lan1g0418 1532 SMART iq_5 830 852 IPR000048 GO:0005515
Lan1g0418 1532 SMART iq_5 757 779 IPR000048 GO:0005515
Lan1g0418 1532 SMART iq_5 805 827 IPR000048 GO:0005515
Lan1g0418 1532 SMART iq_5 734 756 IPR000048 GO:0005515
Lan1g0418 1532 SMART iq_5 853 875 IPR000048 GO:0005515
Lan1g0418 1532 Pfam IQ calmodulin-binding motif 759 778 IPR000048 GO:0005515
Lan1g0418 1532 Pfam Myosin N-terminal SH3-like domain 9 46 IPR004009 GO:0003774|GO:0005524|GO:0016459
Lan1g0418 1532 Gene3D Myosin VI head, motor domain, U50 subdomain 311 601 - -
Lan1g0418 1532 Gene3D - 666 733 - -
Lan1g0418 1532 Gene3D - 252 310 - -
Lan1g0418 1532 SMART MYSc_2a 56 733 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lan1g0418 1532 Coils Coil 877 911 - -
Lan1g0418 1532 PRINTS Myosin heavy chain signature 92 111 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lan1g0418 1532 PRINTS Myosin heavy chain signature 149 174 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lan1g0418 1532 PRINTS Myosin heavy chain signature 196 223 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lan1g0418 1532 PRINTS Myosin heavy chain signature 429 457 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lan1g0418 1532 PRINTS Myosin heavy chain signature 482 510 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lan1g0418 1532 CDD MyosinXI_CBD 1115 1498 IPR037975 GO:0007015
Lan1g0418 1532 ProSiteProfiles IQ motif profile. 737 761 IPR000048 GO:0005515
Lan1g0418 1532 MobiDBLite consensus disorder prediction 1042 1087 - -
Lan1g0418 1532 PANTHER MYOSIN 6 1528 - -
Lan1g0418 1532 PANTHER MYOSIN-5 6 1528 - -
Lan1g0418 1532 ProSiteProfiles IQ motif profile. 806 835 IPR000048 GO:0005515
Lan1g0418 1532 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 785 883 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0418 Lan-Chr1 3348336 3362522 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g0418 67 1532 Myosins gene family AT5G20490 80.082 0.0 2431
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0418 K10357 - gmx:100777802 2689.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan1g0418 1 3348336 3362522 Lan1g0418 1 3348336 3362522 ECH
Lan12g0988 12 16606373 16625246 Lan1g0418 1 3348336 3362522 LSH
Lan1g1285 1 22609301 22622782 Lan1g0418 1 3348336 3362522 LSH