Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lan1g0407 | ATGAGGTTTGTTTTGGGTGTGGGTATGGTTTTGCAGCTTCTGAAGCTCTGCATCATTGGTTTTGCTTTGGCAGTTCAAGGATCCAAAGGGCCTATTATAACTCTATCACCAGCCATCCTTCCTGCCATTCCTCCGATAGTAGAAACACCCGGGCCTATCCATCACGGAGAATCAAGTGAAAGCAATGCACCAAGCTTACCATCAGATCCAGATGGGTTTGTGATATCCCCACCTCCATCAAACTTACCTGTGCACTCTTCCCCTAGTGAAACACCTGGTCCTTTACACCCGAAAGAATCAAGAGGAACTATTGCTCCAAGCTCTCCGGCACTACAAAATGGGTCATTCTTGAATCCTCCAAATACATTACCACCTCCTGCATCAGCTCCAACTCCTCCGAAGATAGAAGACACTGAACCATCCATATCTCCAAGTCCAAGCTTTATAGTATCATCACCACCACTACATGAGGTTGTTCCTTCACCATCAACAGTGCAAGGGAATGTGCCCCCACCAATAAAATCAAGTCCACCTCAAGGGGAAGAACCTGCTGTTAGGCCTCCTGTCCCCACACAAACTGCTCCAGCCCCAGTTGCAATACATTTTGGTGGATCGCCAAAAATTTCACCAGTAAGCCAACCATCTGAAAATGGAACTTTGGCACCTAATGTTGATAATAGGAATGCAAATAAGAGTCACACTGCAGTGCCACTTTCACCAGCACCAGTTGCAACACCTTCTACCAATTTTGCCAATAACTCAGCAGGTAGCCCGCCAACAGAACATGGAACTTTTCCTCCTAAAGAGGGTACAAGTAATGGTCACATCCCAGAACCAACTTCACCAGCACCTGAAGCAGTTAATTTACCAAATATTTCACCAGTTAGCCAGCCAATTGATCATGGAAGTTTGCCTCCAATTGTTCATCAAAGGAATGCGAGTACATGGCACATAGTTTCACCAGCCACAGTTGCAATTCCTCCTGCAACAATAGAAAAAAATTCAACTTTCAGCCAACCTACTCAACATGGAAGTGTTCCACCTAATGTTCATAAAGGAATTGCAAATAAAGGTCACAACCCTGAGACACTTTCACCAGAATCACTTGCGCCCCCACCATGGAAAGAGGAACATAAACCACCAGCAGCCGACCCTATTGTCCCAACAATAACTCCATCCATATTACCTGTACCTGTTACATCACCAGTTACATCACCAGCAAGTGTATTTCCAGTAAATCAGCCATTGGTCCATCCAATTATTCCGGCAGTATCTCCATCAAAATTACCAGTGCCCGTTGCCTCACCCATGTCAACTCCTTCCAGAAGCTTCAATTGGACAAAAGGCAGACCACCAGTTACTGCACCTTCATACAAAAAACTGAAGCCACTTCCAGCAGTAATACATTCCCCTGCTCAAGATCAAGCACTTCCTCCATCATTACCTCCAAAAAGTGGAAGACGACATCATGTTCCACAACCAGTCAACCCAGGTTCTTCAGTGCCTCCACTCTTCTCCCCTATTCATTCACCCAAGACCCAAGCTTTGCCTGCTTCTTCTCCATCAATCAAATCTGTCCCCCAACCAATCAAAAGCCCTGTTTTTCCTCCTAAAGTATCTCCTGTTACGTCTTCTTCCAAGAGCCCTAAGACACCTCCCCTGCCTCAAGTTCAAGCTCTGCCGCCTCCACCTCCTAATCAAGATTGTTTAACAACTGTCTGCTCGGAGCCCTATACAAATTCTCCACCTGGAGCGCCTTGCAGATGTGTCTGGCCCATGCAAGTTGGTCTTCGCCTTGGTGTTTCTCTTTATACCTTCTTCCCTTTGGTTACAGAACTGGCTTCTGAAATTTCCGGTGGGGTTTTCATGAAGCAAAGTCAAGTTCGCATTATGGGAGCCAATGCAGCAAACCAGCAACCTGAGAAAACTGTTGTCCTCATTGATTTGGTACCACTTGGGGAAAAGTTTGATAATACTACAGCCTCTTTCATTTCTGACAGGTTTTGGCATAAACGGGTTGTTATAAAAGCTTCCTACTTTGGAGACTATGACGTGTTATATGTGAACTATCCAGGTTTACCTCCTTCTCCTCCTTTACCACCTTCAAGCATTACTGTAATAGATGGTGGACCATATTCCGGAAATGGTAATGATGGAAGGACAATAAAGCCCCTTGGGGTTGACATACAGAAGAGGCAGCATAAAGGTGGACTTAGCAGAGGCATAATTGCCATTATTGCTGTTTCAGTTTTCCTAGCAGTTATTTTATGCGTTGCTGCTGCTTGGGTCATGTTCAAGTTCAGAGACCATGAAAGTCAACCAGCATCGACCCCACAGGTTTCACAACCATCTGTTGCGAAAGCACCAGGTACCAGTGCCTCAGTAGTTGGAGGCGGGGTTGGTTCCAATTCCACATCATTTCGATCTAGCATTGCTGCTTATGCGGCATCTGCCAAGACTTTCAGTATGAATGACATTGAGAAAGCTACCGATAATTTCAATGCTGCAAGAATACTTGGAGAAGGTGGTTTTGGGCTTGTTTACAGTGGTATCCTTGAAGACGGGACAGAAGTGGCAGTCAAGGTTCTAAAGAGGGAAGATCATCATGGTGATCGTGAATTCTTAGCTGAAGTTGAGATGCTTAGTCGTCTTCACCATAGAAATTTGGTCAAATTGATTGGTATATGTACTGAGGACACATTCCGCTGCTTGGTTTATGAACTTGTCCCAAATGGCAGTGTAGAATACCATTTACATGGAGTTGACAAGGAAAACAGCCCACTTGATTGGGGTACTCGGATGAAGATTGCTCTTGGTGCTGCTCGTGGTCTAGCTTATCTGCATGAAGATTCGACTCCTCATGTTATACATAGGGACTTCAAGTCTAGCAACATATTATTGGAAGATGATTTTACTGCAAAAGTTTCTGATTTTGGATTGGCTCGAACAGCAATGGATGAGGATAACAGACACATATCAACACGTGTCATGGGAACTTTTGGTTATGTAGCTCCGGAGTATGCAATGACTGGGCATCTTCTTGTTAAGAGTGATGTTTACAGCTATGGTGTTGTTCTTCTTGAGCTTTTGACAGGAAGAAAACCTGTAGACATGTCACAACCTCCTGGTCAAGAGAATCTTGTTGCTTGGGCTCGTCCGCTTCTCACAAGTAACGTAGGATTGGAAACAATAATTGACCCATCTTTGGGAGCTGATGTGCCTATTGATAGTGTGGCTAAAGTCGCAGCCATTGCTTCAATGTGTGTACAACCAGAGGTATCAAACCGCCCTTTCATGGGTGAAGTTGTTCAGGCTTTGAAACTTGTTTGCAGTGAATGTGATGAAGCGAAAGAAGAAGCAGGTTTAAGAAGTTGTAGCCAGGAGGATTTGTTTGTTGATTTGGATGTGGAAATTAGTCCTTCTGGGCAACTAGAAGATAATTTAGAAAGGCGATTCTCCGGTACTAACTTTGATACTGGACTTGACATTGAAAGAGGGATGTTGGCATCAGAACTATTCAACTCATCAGCAAGATTTGGTAGGCAGGAATCTGAATCATTTAGAAGACACTCTTATTCAGGTCCTCTGAGAACCGGAAAAAGCAGGCGGTTGTGGCAGATAATGAGAAGGCTTTCTGGTGGTACTGTCAGTGAGCATGGAAACATGTTCAAGTTATGA | 3678 | 0.4445 | MRFVLGVGMVLQLLKLCIIGFALAVQGSKGPIITLSPAILPAIPPIVETPGPIHHGESSESNAPSLPSDPDGFVISPPPSNLPVHSSPSETPGPLHPKESRGTIAPSSPALQNGSFLNPPNTLPPPASAPTPPKIEDTEPSISPSPSFIVSSPPLHEVVPSPSTVQGNVPPPIKSSPPQGEEPAVRPPVPTQTAPAPVAIHFGGSPKISPVSQPSENGTLAPNVDNRNANKSHTAVPLSPAPVATPSTNFANNSAGSPPTEHGTFPPKEGTSNGHIPEPTSPAPEAVNLPNISPVSQPIDHGSLPPIVHQRNASTWHIVSPATVAIPPATIEKNSTFSQPTQHGSVPPNVHKGIANKGHNPETLSPESLAPPPWKEEHKPPAADPIVPTITPSILPVPVTSPVTSPASVFPVNQPLVHPIIPAVSPSKLPVPVASPMSTPSRSFNWTKGRPPVTAPSYKKLKPLPAVIHSPAQDQALPPSLPPKSGRRHHVPQPVNPGSSVPPLFSPIHSPKTQALPASSPSIKSVPQPIKSPVFPPKVSPVTSSSKSPKTPPLPQVQALPPPPPNQDCLTTVCSEPYTNSPPGAPCRCVWPMQVGLRLGVSLYTFFPLVTELASEISGGVFMKQSQVRIMGANAANQQPEKTVVLIDLVPLGEKFDNTTASFISDRFWHKRVVIKASYFGDYDVLYVNYPGLPPSPPLPPSSITVIDGGPYSGNGNDGRTIKPLGVDIQKRQHKGGLSRGIIAIIAVSVFLAVILCVAAAWVMFKFRDHESQPASTPQVSQPSVAKAPGTSASVVGGGVGSNSTSFRSSIAAYAASAKTFSMNDIEKATDNFNAARILGEGGFGLVYSGILEDGTEVAVKVLKREDHHGDREFLAEVEMLSRLHHRNLVKLIGICTEDTFRCLVYELVPNGSVEYHLHGVDKENSPLDWGTRMKIALGAARGLAYLHEDSTPHVIHRDFKSSNILLEDDFTAKVSDFGLARTAMDEDNRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPPGQENLVAWARPLLTSNVGLETIIDPSLGADVPIDSVAKVAAIASMCVQPEVSNRPFMGEVVQALKLVCSECDEAKEEAGLRSCSQEDLFVDLDVEISPSGQLEDNLERRFSGTNFDTGLDIERGMLASELFNSSARFGRQESESFRRHSYSGPLRTGKSRRLWQIMRRLSGGTVSEHGNMFKL* | 1226 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lan1g0407 | 1225 | MobiDBLite | consensus disorder prediction | 472 | 563 | - | - | |
Lan1g0407 | 1225 | MobiDBLite | consensus disorder prediction | 208 | 260 | - | - | |
Lan1g0407 | 1225 | ProSitePatterns | Protein kinases ATP-binding region signature. | 839 | 861 | IPR017441 | GO:0005524 | |
Lan1g0407 | 1225 | MobiDBLite | consensus disorder prediction | 71 | 85 | - | - | |
Lan1g0407 | 1225 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 955 | 967 | IPR008271 | GO:0004672|GO:0006468 | |
Lan1g0407 | 1225 | MobiDBLite | consensus disorder prediction | 512 | 527 | - | - | |
Lan1g0407 | 1225 | MobiDBLite | consensus disorder prediction | 435 | 450 | - | - | |
Lan1g0407 | 1225 | MobiDBLite | consensus disorder prediction | 50 | 302 | - | - | |
Lan1g0407 | 1225 | PANTHER | OS01G0750732 PROTEIN | 9 | 73 | - | - | |
Lan1g0407 | 1225 | PANTHER | OS01G0750732 PROTEIN | 388 | 1225 | - | - | |
Lan1g0407 | 1225 | CDD | STKc_IRAK | 839 | 1107 | - | - | |
Lan1g0407 | 1225 | MobiDBLite | consensus disorder prediction | 119 | 139 | - | - | |
Lan1g0407 | 1225 | MobiDBLite | consensus disorder prediction | 165 | 194 | - | - | |
Lan1g0407 | 1225 | MobiDBLite | consensus disorder prediction | 353 | 380 | - | - | |
Lan1g0407 | 1225 | MobiDBLite | consensus disorder prediction | 435 | 458 | - | - | |
Lan1g0407 | 1225 | MobiDBLite | consensus disorder prediction | 538 | 553 | - | - | |
Lan1g0407 | 1225 | Pfam | Protein tyrosine and serine/threonine kinase | 836 | 1106 | IPR001245 | GO:0004672|GO:0006468 | |
Lan1g0407 | 1225 | Gene3D | Phosphorylase Kinase; domain 1 | 805 | 908 | - | - | |
Lan1g0407 | 1225 | SUPERFAMILY | Protein kinase-like (PK-like) | 814 | 1106 | IPR011009 | - | |
Lan1g0407 | 1225 | ProSiteProfiles | Protein kinase domain profile. | 833 | 1109 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Lan1g0407 | 1225 | PANTHER | PROTEIN KINASE SUPERFAMILY PROTEIN | 388 | 1225 | - | - | |
Lan1g0407 | 1225 | PANTHER | PROTEIN KINASE SUPERFAMILY PROTEIN | 9 | 73 | - | - | |
Lan1g0407 | 1225 | Gene3D | Transferase(Phosphotransferase) domain 1 | 909 | 1129 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lan1g0407 | Lan-Chr1 | 3256478 | 3264875 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lan1g0407 | 477 | 1220 | Receptor kinase-like Gene Family | AT5G56890 | 61.184 | 0.0 | 848 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_Extensin | Lan1g0407 | PK_Tyr_Ser-Thr | 2.6e-48 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lan1g0407 | - | - | gmx:100816296 | 1557.73 |