Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0407 ATGAGGTTTGTTTTGGGTGTGGGTATGGTTTTGCAGCTTCTGAAGCTCTGCATCATTGGTTTTGCTTTGGCAGTTCAAGGATCCAAAGGGCCTATTATAACTCTATCACCAGCCATCCTTCCTGCCATTCCTCCGATAGTAGAAACACCCGGGCCTATCCATCACGGAGAATCAAGTGAAAGCAATGCACCAAGCTTACCATCAGATCCAGATGGGTTTGTGATATCCCCACCTCCATCAAACTTACCTGTGCACTCTTCCCCTAGTGAAACACCTGGTCCTTTACACCCGAAAGAATCAAGAGGAACTATTGCTCCAAGCTCTCCGGCACTACAAAATGGGTCATTCTTGAATCCTCCAAATACATTACCACCTCCTGCATCAGCTCCAACTCCTCCGAAGATAGAAGACACTGAACCATCCATATCTCCAAGTCCAAGCTTTATAGTATCATCACCACCACTACATGAGGTTGTTCCTTCACCATCAACAGTGCAAGGGAATGTGCCCCCACCAATAAAATCAAGTCCACCTCAAGGGGAAGAACCTGCTGTTAGGCCTCCTGTCCCCACACAAACTGCTCCAGCCCCAGTTGCAATACATTTTGGTGGATCGCCAAAAATTTCACCAGTAAGCCAACCATCTGAAAATGGAACTTTGGCACCTAATGTTGATAATAGGAATGCAAATAAGAGTCACACTGCAGTGCCACTTTCACCAGCACCAGTTGCAACACCTTCTACCAATTTTGCCAATAACTCAGCAGGTAGCCCGCCAACAGAACATGGAACTTTTCCTCCTAAAGAGGGTACAAGTAATGGTCACATCCCAGAACCAACTTCACCAGCACCTGAAGCAGTTAATTTACCAAATATTTCACCAGTTAGCCAGCCAATTGATCATGGAAGTTTGCCTCCAATTGTTCATCAAAGGAATGCGAGTACATGGCACATAGTTTCACCAGCCACAGTTGCAATTCCTCCTGCAACAATAGAAAAAAATTCAACTTTCAGCCAACCTACTCAACATGGAAGTGTTCCACCTAATGTTCATAAAGGAATTGCAAATAAAGGTCACAACCCTGAGACACTTTCACCAGAATCACTTGCGCCCCCACCATGGAAAGAGGAACATAAACCACCAGCAGCCGACCCTATTGTCCCAACAATAACTCCATCCATATTACCTGTACCTGTTACATCACCAGTTACATCACCAGCAAGTGTATTTCCAGTAAATCAGCCATTGGTCCATCCAATTATTCCGGCAGTATCTCCATCAAAATTACCAGTGCCCGTTGCCTCACCCATGTCAACTCCTTCCAGAAGCTTCAATTGGACAAAAGGCAGACCACCAGTTACTGCACCTTCATACAAAAAACTGAAGCCACTTCCAGCAGTAATACATTCCCCTGCTCAAGATCAAGCACTTCCTCCATCATTACCTCCAAAAAGTGGAAGACGACATCATGTTCCACAACCAGTCAACCCAGGTTCTTCAGTGCCTCCACTCTTCTCCCCTATTCATTCACCCAAGACCCAAGCTTTGCCTGCTTCTTCTCCATCAATCAAATCTGTCCCCCAACCAATCAAAAGCCCTGTTTTTCCTCCTAAAGTATCTCCTGTTACGTCTTCTTCCAAGAGCCCTAAGACACCTCCCCTGCCTCAAGTTCAAGCTCTGCCGCCTCCACCTCCTAATCAAGATTGTTTAACAACTGTCTGCTCGGAGCCCTATACAAATTCTCCACCTGGAGCGCCTTGCAGATGTGTCTGGCCCATGCAAGTTGGTCTTCGCCTTGGTGTTTCTCTTTATACCTTCTTCCCTTTGGTTACAGAACTGGCTTCTGAAATTTCCGGTGGGGTTTTCATGAAGCAAAGTCAAGTTCGCATTATGGGAGCCAATGCAGCAAACCAGCAACCTGAGAAAACTGTTGTCCTCATTGATTTGGTACCACTTGGGGAAAAGTTTGATAATACTACAGCCTCTTTCATTTCTGACAGGTTTTGGCATAAACGGGTTGTTATAAAAGCTTCCTACTTTGGAGACTATGACGTGTTATATGTGAACTATCCAGGTTTACCTCCTTCTCCTCCTTTACCACCTTCAAGCATTACTGTAATAGATGGTGGACCATATTCCGGAAATGGTAATGATGGAAGGACAATAAAGCCCCTTGGGGTTGACATACAGAAGAGGCAGCATAAAGGTGGACTTAGCAGAGGCATAATTGCCATTATTGCTGTTTCAGTTTTCCTAGCAGTTATTTTATGCGTTGCTGCTGCTTGGGTCATGTTCAAGTTCAGAGACCATGAAAGTCAACCAGCATCGACCCCACAGGTTTCACAACCATCTGTTGCGAAAGCACCAGGTACCAGTGCCTCAGTAGTTGGAGGCGGGGTTGGTTCCAATTCCACATCATTTCGATCTAGCATTGCTGCTTATGCGGCATCTGCCAAGACTTTCAGTATGAATGACATTGAGAAAGCTACCGATAATTTCAATGCTGCAAGAATACTTGGAGAAGGTGGTTTTGGGCTTGTTTACAGTGGTATCCTTGAAGACGGGACAGAAGTGGCAGTCAAGGTTCTAAAGAGGGAAGATCATCATGGTGATCGTGAATTCTTAGCTGAAGTTGAGATGCTTAGTCGTCTTCACCATAGAAATTTGGTCAAATTGATTGGTATATGTACTGAGGACACATTCCGCTGCTTGGTTTATGAACTTGTCCCAAATGGCAGTGTAGAATACCATTTACATGGAGTTGACAAGGAAAACAGCCCACTTGATTGGGGTACTCGGATGAAGATTGCTCTTGGTGCTGCTCGTGGTCTAGCTTATCTGCATGAAGATTCGACTCCTCATGTTATACATAGGGACTTCAAGTCTAGCAACATATTATTGGAAGATGATTTTACTGCAAAAGTTTCTGATTTTGGATTGGCTCGAACAGCAATGGATGAGGATAACAGACACATATCAACACGTGTCATGGGAACTTTTGGTTATGTAGCTCCGGAGTATGCAATGACTGGGCATCTTCTTGTTAAGAGTGATGTTTACAGCTATGGTGTTGTTCTTCTTGAGCTTTTGACAGGAAGAAAACCTGTAGACATGTCACAACCTCCTGGTCAAGAGAATCTTGTTGCTTGGGCTCGTCCGCTTCTCACAAGTAACGTAGGATTGGAAACAATAATTGACCCATCTTTGGGAGCTGATGTGCCTATTGATAGTGTGGCTAAAGTCGCAGCCATTGCTTCAATGTGTGTACAACCAGAGGTATCAAACCGCCCTTTCATGGGTGAAGTTGTTCAGGCTTTGAAACTTGTTTGCAGTGAATGTGATGAAGCGAAAGAAGAAGCAGGTTTAAGAAGTTGTAGCCAGGAGGATTTGTTTGTTGATTTGGATGTGGAAATTAGTCCTTCTGGGCAACTAGAAGATAATTTAGAAAGGCGATTCTCCGGTACTAACTTTGATACTGGACTTGACATTGAAAGAGGGATGTTGGCATCAGAACTATTCAACTCATCAGCAAGATTTGGTAGGCAGGAATCTGAATCATTTAGAAGACACTCTTATTCAGGTCCTCTGAGAACCGGAAAAAGCAGGCGGTTGTGGCAGATAATGAGAAGGCTTTCTGGTGGTACTGTCAGTGAGCATGGAAACATGTTCAAGTTATGA 3678 0.4445 MRFVLGVGMVLQLLKLCIIGFALAVQGSKGPIITLSPAILPAIPPIVETPGPIHHGESSESNAPSLPSDPDGFVISPPPSNLPVHSSPSETPGPLHPKESRGTIAPSSPALQNGSFLNPPNTLPPPASAPTPPKIEDTEPSISPSPSFIVSSPPLHEVVPSPSTVQGNVPPPIKSSPPQGEEPAVRPPVPTQTAPAPVAIHFGGSPKISPVSQPSENGTLAPNVDNRNANKSHTAVPLSPAPVATPSTNFANNSAGSPPTEHGTFPPKEGTSNGHIPEPTSPAPEAVNLPNISPVSQPIDHGSLPPIVHQRNASTWHIVSPATVAIPPATIEKNSTFSQPTQHGSVPPNVHKGIANKGHNPETLSPESLAPPPWKEEHKPPAADPIVPTITPSILPVPVTSPVTSPASVFPVNQPLVHPIIPAVSPSKLPVPVASPMSTPSRSFNWTKGRPPVTAPSYKKLKPLPAVIHSPAQDQALPPSLPPKSGRRHHVPQPVNPGSSVPPLFSPIHSPKTQALPASSPSIKSVPQPIKSPVFPPKVSPVTSSSKSPKTPPLPQVQALPPPPPNQDCLTTVCSEPYTNSPPGAPCRCVWPMQVGLRLGVSLYTFFPLVTELASEISGGVFMKQSQVRIMGANAANQQPEKTVVLIDLVPLGEKFDNTTASFISDRFWHKRVVIKASYFGDYDVLYVNYPGLPPSPPLPPSSITVIDGGPYSGNGNDGRTIKPLGVDIQKRQHKGGLSRGIIAIIAVSVFLAVILCVAAAWVMFKFRDHESQPASTPQVSQPSVAKAPGTSASVVGGGVGSNSTSFRSSIAAYAASAKTFSMNDIEKATDNFNAARILGEGGFGLVYSGILEDGTEVAVKVLKREDHHGDREFLAEVEMLSRLHHRNLVKLIGICTEDTFRCLVYELVPNGSVEYHLHGVDKENSPLDWGTRMKIALGAARGLAYLHEDSTPHVIHRDFKSSNILLEDDFTAKVSDFGLARTAMDEDNRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPPGQENLVAWARPLLTSNVGLETIIDPSLGADVPIDSVAKVAAIASMCVQPEVSNRPFMGEVVQALKLVCSECDEAKEEAGLRSCSQEDLFVDLDVEISPSGQLEDNLERRFSGTNFDTGLDIERGMLASELFNSSARFGRQESESFRRHSYSGPLRTGKSRRLWQIMRRLSGGTVSEHGNMFKL* 1226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0407 1225 MobiDBLite consensus disorder prediction 472 563 - -
Lan1g0407 1225 MobiDBLite consensus disorder prediction 208 260 - -
Lan1g0407 1225 ProSitePatterns Protein kinases ATP-binding region signature. 839 861 IPR017441 GO:0005524
Lan1g0407 1225 MobiDBLite consensus disorder prediction 71 85 - -
Lan1g0407 1225 ProSitePatterns Serine/Threonine protein kinases active-site signature. 955 967 IPR008271 GO:0004672|GO:0006468
Lan1g0407 1225 MobiDBLite consensus disorder prediction 512 527 - -
Lan1g0407 1225 MobiDBLite consensus disorder prediction 435 450 - -
Lan1g0407 1225 MobiDBLite consensus disorder prediction 50 302 - -
Lan1g0407 1225 PANTHER OS01G0750732 PROTEIN 9 73 - -
Lan1g0407 1225 PANTHER OS01G0750732 PROTEIN 388 1225 - -
Lan1g0407 1225 CDD STKc_IRAK 839 1107 - -
Lan1g0407 1225 MobiDBLite consensus disorder prediction 119 139 - -
Lan1g0407 1225 MobiDBLite consensus disorder prediction 165 194 - -
Lan1g0407 1225 MobiDBLite consensus disorder prediction 353 380 - -
Lan1g0407 1225 MobiDBLite consensus disorder prediction 435 458 - -
Lan1g0407 1225 MobiDBLite consensus disorder prediction 538 553 - -
Lan1g0407 1225 Pfam Protein tyrosine and serine/threonine kinase 836 1106 IPR001245 GO:0004672|GO:0006468
Lan1g0407 1225 Gene3D Phosphorylase Kinase; domain 1 805 908 - -
Lan1g0407 1225 SUPERFAMILY Protein kinase-like (PK-like) 814 1106 IPR011009 -
Lan1g0407 1225 ProSiteProfiles Protein kinase domain profile. 833 1109 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan1g0407 1225 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 388 1225 - -
Lan1g0407 1225 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 9 73 - -
Lan1g0407 1225 Gene3D Transferase(Phosphotransferase) domain 1 909 1129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0407 Lan-Chr1 3256478 3264875 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g0407 477 1220 Receptor kinase-like Gene Family AT5G56890 61.184 0.0 848
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Lan1g0407 PK_Tyr_Ser-Thr 2.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0407 - - gmx:100816296 1557.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan1g0407 1 3256478 3264875 Lan1g0407 1 3256478 3264875 ECH