Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0403 ATGAAATTGGTTGAGAGAATAGACTTAGAAGAAGCAGCTTCTGCTGGCATGAAAGGAATGCATCATCTCCTTCAACTCATGTCTTCTTCTGATGATCAAACCAATGTGAAATCCAACCACATTGACTGCACTGAAATCACTGAATTCACTGTCTCCAAATTCAAGCAAGTTATTAACTTGCTCAATGCTAATTTATCAAAACCACAAACTTCACCACCACCTTCTGGCCATGCTCGTTTTCGTCGCACACCTTTTATCCCTTCTCCATCTCCATCTGAAACTGAGGAATTGAACCATATCAACCATCAACCCCAAACTGAGTCAGTGACTCAGGGTTTATCGTCTCATCATTCTACCAACCCTGTCATTGTTGAATCTAATCCAAACCCATGCACTGAGTTGGTAACTGTTCCTCAAATCTCTAGTCCCAATGACAGTTCCCCTAATATATCTATGGCTGGAGACAGAAGCGTTCCTGATACCAACGTGGATCTCTCCATTATCGTCGCGGCGCAACCTATCTCAGCCGCTAAGCCTCTTCCACTATCTTCATCTCGTGGGAAAAGGGGTCCCAGGGATACCCATTCTGAGGACTGTCCTTGCTCCAAAACAAGGGTTCAACCGGGTGTAGTAAGGACTACTCGGGTGAGGATTGGAGATATTGCTGATAGGTATTCATGGAGGAAGTATGGTCAAAAGTACATTAAGGGAGCACCATATCCGCGGTGCAGTAGTGTAAAAGGATGTCCAGCAAGGAAGCGTGTTGAAAGAGACGAAGAAGATTTCAATATCCTCGTTATTAGCTACCTTGGAGATCATTGTCACCCCAATGCTTAA 837 0.4421 MKLVERIDLEEAASAGMKGMHHLLQLMSSSDDQTNVKSNHIDCTEITEFTVSKFKQVINLLNANLSKPQTSPPPSGHARFRRTPFIPSPSPSETEELNHINHQPQTESVTQGLSSHHSTNPVIVESNPNPCTELVTVPQISSPNDSSPNISMAGDRSVPDTNVDLSIIVAAQPISAAKPLPLSSSRGKRGPRDTHSEDCPCSKTRVQPGVVRTTRVRIGDIADRYSWRKYGQKYIKGAPYPRCSSVKGCPARKRVERDEEDFNILVISYLGDHCHPNA* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0403 278 MobiDBLite consensus disorder prediction 179 204 - -
Lan1g0403 278 Pfam WRKY DNA -binding domain 223 275 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan1g0403 278 MobiDBLite consensus disorder prediction 87 128 - -
Lan1g0403 278 ProSiteProfiles WRKY domain profile. 216 278 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan1g0403 278 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 5 276 - -
Lan1g0403 278 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 5 276 IPR044810 GO:0003700
Lan1g0403 278 MobiDBLite consensus disorder prediction 65 128 - -
Lan1g0403 278 SMART WRKY_cls 221 277 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan1g0403 278 SUPERFAMILY WRKY DNA-binding domain 215 276 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan1g0403 278 Gene3D WRKY domain 205 277 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0403 Lan-Chr1 3219197 3220249 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g0403 2 275 WRKY Transcription Factor Family AT2G24570 34.505 6.42e-38 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lan1g0403 WRKY 4.7e-16 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0403 - - lang:109325740 560.451
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan1g0403 1 3219197 3220249 Lan1g0403 1 3219197 3220249 ECH
Lan18g0997 18 15032237 15033903 Lan1g0403 1 3219197 3220249 PCT
Lan1g0403 1 3219197 3220249 Lan14g0141 14 1758943 1760759 PCT
Lan14g0141 14 1758943 1760759 Lan1g0403 1 3219197 3220249 PCT