Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0362 ATGGAACCCACACATGATGAACATGAAGAGTTCATTTTCCGTTCCAAACTCCCTGACATCTACATCCCAACACACCTCCCATTACACACTTACCTCTTCGAAAACCTATCCCAGTTCAAAGACCGTCCATGCCTCATCGACGGCAACACCGGCGAGACTTTCACTTACGCCGACGTGGAACTCACCGCCCGCAAAGTCGCCGCCGGTCTCAACAATATTGGCATCAAACAATATGACGTCATCCTCATCCTTCTCCATAATTGCCCTCAATTCGTGTTCGCTTTCCTCGGTGCTTCTTACCGCGGCGCCACCATCACCTTCGCCAATCCCTCATATACAACGGCTGAAGTTGTGAAACAAGCCACCGCATCAAACTCCAAGCTCATCATAACACAATCCTCCTATGTTGAAAAAGTAAAGGATTTCGTGAGAGAAAACGACATCAAAGTGGTGTGCATCGACACACCGCCAGAGGGCGATTACTTGAACTTCTCTGAGTTGATCACTTCTGACGAGAGTGATATCCCTACTGTGGAAATATCCCCTGACGATGTCGTTCTGCTACCTTTTTCTTCCGGCACGACGGGGAAACCAAAAGGGGTGATGTTAACACACAAAGGGTTAGTCACAATTGTGGCACAACAAGTTGATGGAGAAAACCCTAATATTTATTTACACAGCAAAGATGTGATCCTATGTGTGCTGCCACTCTATCACGTTTTTGCAATTAACTCTGCTTTGCTCTGTGGACTTAGAGTTGGTGCTGCAATTTTAATCATGCCAAGGTTTGAGATCATTAAGGTGTTAGAGTTGGTTCAAAAACATAAGGTGACTTTTGCACCATTTGTGCCTCCCATCCTTTTGGCAATAGCGAAAAATCCTGAAGTGGAACAATACGACTTGTCGTCGATTAGAATGATTATGTCTGGTGCGGCTCCTTTAGAAAAGGAACTTCAGGAAACTGTGAGTGCTACGCTTCCCAACGTCATATTTGGACAGGGGTATGGAATGAGCGAATCGATAGTCTCAGTGTCCTTAGCGTTTTCAAAGGAGCCATTTGAGGTGAAATCAGGTTCATTCGGGACCATCGTAAGAAATGCAGAGATGAAGATTGTGGACCTTGATACAGGCGCATCTCTTCCTAGAAATAAAGCTGGTGAGATTTGCATTAGAGGCAACCAGATTATGAAAGGTTACCTAAACGACCCAGAGGCCACAAGAATAAGCATAGATGAAGGGAGATGGTTGCACACGGGTGATATTGGTTATATCACTGATAATGATGAATTTGTTGTTGTTGATCGATTAAAGGATGTAATCAAATATAAAGGATATCAAGTGGCTCCTGCTGAGCTTGAAGACTTGTTGATTACCCACCCAGACATTCTCGAAGCTGTTGTTGTATCCATGAAAGATAAGGATGCAGGGGAGGTTCCGGTTGCATTTGTTGTAAGGTCAAATGGTTCTACGATTTTAGAGGATGAAATCAAGCGATATATCTCAAACCAGGTCGTGTTTTATAAAAGATTTAAGAGGGTTTTCTTTGTGGACTCAATTCCAAAGGCACCCTCGGGCAAGATTTTGAGGAAAGAGCTCAGAGCAAGGCTTGCAGCAGGTCCTATAGTTTAG 1629 0.442 MEPTHDEHEEFIFRSKLPDIYIPTHLPLHTYLFENLSQFKDRPCLIDGNTGETFTYADVELTARKVAAGLNNIGIKQYDVILILLHNCPQFVFAFLGASYRGATITFANPSYTTAEVVKQATASNSKLIITQSSYVEKVKDFVRENDIKVVCIDTPPEGDYLNFSELITSDESDIPTVEISPDDVVLLPFSSGTTGKPKGVMLTHKGLVTIVAQQVDGENPNIYLHSKDVILCVLPLYHVFAINSALLCGLRVGAAILIMPRFEIIKVLELVQKHKVTFAPFVPPILLAIAKNPEVEQYDLSSIRMIMSGAAPLEKELQETVSATLPNVIFGQGYGMSESIVSVSLAFSKEPFEVKSGSFGTIVRNAEMKIVDLDTGASLPRNKAGEICIRGNQIMKGYLNDPEATRISIDEGRWLHTGDIGYITDNDEFVVVDRLKDVIKYKGYQVAPAELEDLLITHPDILEAVVVSMKDKDAGEVPVAFVVRSNGSTILEDEIKRYISNQVVFYKRFKRVFFVDSIPKAPSGKILRKELRARLAAGPIV* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0362 542 PANTHER 4-COUMARATE:COA LIGASE-LIKE PROTEIN 7 536 - -
Lan1g0362 542 SUPERFAMILY Acetyl-CoA synthetase-like 7 537 - -
Lan1g0362 542 ProSitePatterns Putative AMP-binding domain signature. 188 199 IPR020845 -
Lan1g0362 542 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 7 536 - -
Lan1g0362 542 Gene3D - 437 538 IPR045851 -
Lan1g0362 542 Gene3D - 4 436 IPR042099 -
Lan1g0362 542 Pfam AMP-binding enzyme 34 442 IPR000873 -
Lan1g0362 542 Pfam AMP-binding enzyme C-terminal domain 451 526 IPR025110 -
Lan1g0362 542 CDD 4CL 22 532 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0362 Lan-Chr1 2764790 2774437 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g0362 4 504 Monolignol Biosynthesis Gene Families AT1G51680 62.427 0.0 643
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0362 K01904 - gmx:100779668 805.053
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan1g0362 1 2764790 2774437 Lan1g0362 1 2764790 2774437 ECH
Lan1g1218 1 22059628 22064633 Lan1g0362 1 2764790 2774437 LSH