Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0361 ATGGAACCCACACATGATGAACATGAAGAGTTCATTTTCCGTTCCAAACTCCCTGACATCTACATCCCAACACACCTCCCATTACACACTTACCTCTTCGAAAACCTATCCCAGTTCAAAGACCGTCCATGCCTCATCGACGGCAACACCGGCGAGACTTTCACTTACGCCGACGTGGAACTCACCGCCCGCAAAGTCGCCGCCGGTCTCAACAATATTGGCATCAAACAATATGACGTCATCCTGGTCCTTCTCCATAATTGTCCTCAATTCGTGTTCGCTTTCCTCGGTGCTTCTTACCGTGGCGCCATCGTCACCCCCGGAAATCCCTTATATACATCGGCTGAAGTTGCGAAACAGGCCATCGCGTCAAATGCCAAGCTCATCATAACACAATCCTCATGCGTCGAAAAAGTAAAGGATTTCGCTAGAGAAAACGGTATCAAAGTGATGTGTATTGACACACCACCAGAGGGCGATTACTTGAGCTTCTCTGAGTTGATCACCTCTAATGAGAGTGATATCCCCACAATAGAAATATCCCAGGACGACGTTTTTGCACTACCTTATTCTTCTGGCACGACGGGGAAACCAAAAGGGGTGATGCTAACACACAAAGGGTTAGTCACAACCGTGGCACAACAAGTTGATGGAGAAAACCCGAATGTTTATTTACACAGCAAAGACGTGATCCTATGTGTGTTACCACTCTATCACATTTTTGCAATTAACTCTGCTTTGCTCTGTGGACTTAGAGTTGGTGCTGCAATTTTAATCATGCCAAGGTTTGAGATCATTAAGGTGTTACAGTTGGTTCAAAAACATAAGGTGACTTTTGCACCATTTGTGCCTCCTATCATTTTGGCAATAGCAAAAAATCCTGAAGTGGAACGATACGACTTGTCGTCGATTAGAATGATTATGTCTGGTGCAGCTCCTTTGGGAAAGGAACTTGTGGAAGCTTTTAGTGCTAAGCTTCCCAACGTCACACTTGGACAGGGTTATGGAATGACCGAAGCGGGACCAGTGCTCTCGATGTCCTTAGCGTTTGCAAAGGAACCATTTGAGGCGAAATCAGGTTCATGCGGGACTGTCATAAGAAATGCGGAGATGAAGATTATTGACCCTGATACAGGTACTTCGCTTCCCAGGAATAAAGCTGGTGAGATTTGCATTAGAGGCAACCAGATCATGAAAGGTTACCTAAACAACCCGGATGCCACAAAAATAAGCATAGACGAAGGTGGATGGTTGCACTCGGGAGATATTGGTTATATTGCTGATAATGGTGAACTTTTCGTTGTTGATCGATTAAAGGAGATAATCAAATACAAAGGATATCAAGTGGCTCCTGCTGAGCTTGAAGACATGTTGATTTCCCATCCAGACATTTTCGACACTGCTGTTGTATCCATGAAAGATGAGGATGGAGAGGAGGTTCCAGTTGCATATGTTGTAAGGTCAAATGGTTCTGAGATCTTGGAGGATGAAATCAAGCAATATATCTCAAAGCAGGTTGTGTTTTATAAAAGAATCAAAAGGGTTTTCTTTGTGGACTCAATTCCAAAGGCATCCTCAGGCAAGATTTTGAGGAAAGAGCTCAGAGCAAGGCTTGCAGCAGGTCCTATAGCTTAG 1635 0.444 MEPTHDEHEEFIFRSKLPDIYIPTHLPLHTYLFENLSQFKDRPCLIDGNTGETFTYADVELTARKVAAGLNNIGIKQYDVILVLLHNCPQFVFAFLGASYRGAIVTPGNPLYTSAEVAKQAIASNAKLIITQSSCVEKVKDFARENGIKVMCIDTPPEGDYLSFSELITSNESDIPTIEISQDDVFALPYSSGTTGKPKGVMLTHKGLVTTVAQQVDGENPNVYLHSKDVILCVLPLYHIFAINSALLCGLRVGAAILIMPRFEIIKVLQLVQKHKVTFAPFVPPIILAIAKNPEVERYDLSSIRMIMSGAAPLGKELVEAFSAKLPNVTLGQGYGMTEAGPVLSMSLAFAKEPFEAKSGSCGTVIRNAEMKIIDPDTGTSLPRNKAGEICIRGNQIMKGYLNNPDATKISIDEGGWLHSGDIGYIADNGELFVVDRLKEIIKYKGYQVAPAELEDMLISHPDIFDTAVVSMKDEDGEEVPVAYVVRSNGSEILEDEIKQYISKQVVFYKRIKRVFFVDSIPKASSGKILRKELRARLAAGPIA* 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0361 544 Pfam AMP-binding enzyme C-terminal domain 453 528 IPR025110 -
Lan1g0361 544 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 7 538 - -
Lan1g0361 544 Pfam AMP-binding enzyme 34 444 IPR000873 -
Lan1g0361 544 ProSitePatterns Putative AMP-binding domain signature. 188 199 IPR020845 -
Lan1g0361 544 PANTHER 4-COUMARATE:COA LIGASE-LIKE PROTEIN 7 538 - -
Lan1g0361 544 CDD 4CL 22 534 - -
Lan1g0361 544 Gene3D - 439 540 IPR045851 -
Lan1g0361 544 SUPERFAMILY Acetyl-CoA synthetase-like 6 540 - -
Lan1g0361 544 Gene3D - 4 438 IPR042099 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0361 Lan-Chr1 2739961 2744195 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g0361 4 506 Monolignol Biosynthesis Gene Families AT1G51680 64.775 0.0 681
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0361 K01904 - gmx:100779668 832.017
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g1048 12 17107099 17112654 Lan1g0361 1 2739961 2744195 LSH