Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0356 ATGTGTAATAATAAAGGGTTGCAATGTTTGATCCAATGTGATAATAATCTATTTGATCATCATTCACAACAACAACACTGTTTGATGGATAGCCCCACCGCGGTTCGATCATCGGCTACGGGTGGTTCCGGTTCCAATGACGGTACACAGCGTGTTAAATTCTTGTGTAGCTTCCTAGGGAGCATAATGTCACGTCCCCAAGATGGGAAATTACGTTATGTAGGTGGAGAAACACGTATTTTGAATGTGTCACGTGATATTAATTATGAGGAATTGATGGTGAAGATGAGAGAGTTGTATGATGGTGCTGCTGTGTTGAAATATCAACAACCTGATGAGGATCTTGATGCACTTGTCTCTGTTGTAAATGATGATGATGTGGTTAACATGATGGAAGAGTATGATAAGTTAGGTTCAGGTGATGGATTCACTAGGCTCAGGATTTTCTTGTTTTCACAATTGGAACATGATGGTTCATCACACTTCACTGACGGGGATGATAATGAGAGGAGGTACGTTGATGCATTGAATAGTTTAAATGATGTTTCGGATTTTAGGAAGTTGAATCAAATGGAGTTTCATGTTATGAGCCCTCTTGAGGATATACATGTGCCTGATCAATTCTATAATCCAATTAGTGTGGAGAGTGGGATTCATAGCCAGAGAAGTGGGGAACTATCTATGCCACCACAGTATAATTTGCATCATGTTGCAACCCAGCACCAGCAGCAACCTATGAGCCAGAGGTTTAGTGAAATGGATTCTCCATGGAGTCCTTCTTTTTACTCTCCCAAGTATCATGCTCACCATGACTCAAGGCCATTGGTAGAATTTCCATCTTCTCATTCGAGTGCGAAGTACCGAGGGCCGTTTGAGTTACCAGATTATGGAGTGCCCGAAGAGTATGCTCGACATCATTTGTATGACAATCAACAACAATATCCTGAAAATGTTGTGTGGTTACCAACTGCTGCACCATCACATGGTGAGATGTCAGGGTTTCCAGGAAACATTCTCCGTGGCCCTAATGTTGTTGATGGGAACAGTATATGTGACCACTGTCGCATGAGTTTTCCTAGAGGTCAACCACCTCTGGAGCTTCCTAATAATATCAGTAATGGACTTTCACCGGTTGTTGCTAATCCGTGTGCAGAATGCCCTTCAACTACGGTGAACTCTATCTATCCCAACGAGCCTAGTAATGATCTTGTTATAAACTCGTCTATGCATGGTAGCACGAATGATGGACATGCATACTTGTCTAGGCATGGTAGTGTGAATGATAGACATACTTTGTCTGCTAATTACGTTCAGCAACGACCTGGACCTGAAATGGGGACTGAACTATTTCCTGACCAAACCATGCCTGCTATACCACATATCCAAATTCATTCCCTGGAAGAGCACAATATGCGGTTTGGAAATCCCCCTTCTCCATATGCAGTGGATAGTCATTATACTGTTCCTCATGGACATGTACCCGGTCATGCTTATGCTTTCTGGAGAAACACTCCCGCTCCTGTTCACATTGGACCATGTTATGAGGTATCTCAGCAGGCCAGTGGTATGATAAATGCTGGATTGATCAGGGTAGAGAGCAATCCAGGATTTTTAGTTGGGCGAGATAGTCAAAACGCTATTCCTTTGGTAGATTCCTCACAGATATTGTCAGGACATGACGGGTCGGCTATCTCAGAAAATCCTTATGCACATGCTCTGAAATTGAATTCAAATGCCATTGGTCAGGAAAATCAACATCCAATTACTATAGATGCCACCCCCTCCCCACAGAACATGAAAGCTAGCACTTTCGTGGAACCTGTGCAGCTGCCAAAATCATCTGTTAACATGGTTCACGGAAAAGTCGAAAACTCTAATGCACAGCCACAGAGTATATCTGTTTCAGAGCAAAATAAAAGTGCGGAGAATGTATTTGAAGCTGTTGGTCCTGTTGAGTCTAATAATTCAAATTCTAAACCTGCATCACAGTGTGGAAATGTTGAGAAACTGGCAGATAAAGACCCTTCTGCTCCAGAAGATTCTAAGCATTTCTCGCCCGAGTTGATTGCTTCTGTTAAAAAGGCTGCATTAGAAGGTGCTGATGAGGTGAGAGCTAAAGCTGATGAGCATGCCAATTCTGAGATGCACAATGCAACTCCCAAAGAAGAAACAGCAAATGAAGTAGAACTAGTGAATGCTCATGGTGATTTAGAATTGGAACCTGAAAATGACCACGTAGATACTTCTAAAATTGAGCCTACAAAGGCGGAGGAAGAAGCAATTGCCAGGGGATTGCAGACAATTAAAAATGATGATTTGGAGGAGATCCGCGAGCTAGGTTCTGGAACCTATGGGGCTGTTTATCATGGGAAATGGAAGGGTTCTAATGTCGCCATTAAGAGAATAAAAGCTAGTTGTTTTGCTGGAAGACCATCTGAAAGAGCAAGAATGATTGCAGATTTTTGGAAAGAGGCATTGATGCTGAGTTCATTGCATCATCCAAATGTTGTTTCCTTCTATGGCATTGTTCGTGATGGTCCCGATGGTTCTTTAGCAACTGTGACAGAATTCATGGTTAATGGATCTTTAAAACAGTTCTTGCATAAGAAAGATAGAACGATAGATCGTCGTAAGAGGCTCATAATAGCTATGGATGCTGCATTTGGGATGGAATATTTGCATGCAAAGAACATTGTGCATTTTGATTTGAAATGCGAGAATCTATTGGTTAATATGAGAGATCCGCAACGGCCTATCTGCAAGATTGGTGATTTGGGTTTATCAAAGGTCAAACAGCACACACTAGTGTCAGGAGGGGTACGAGGAACTTTGCCGTGGATGGCACCTGAACTTCTTAGCGGGAAAAGCACTATGGTGACAGAGAAGATTGATGTTTACTCATTTGGGATAGTCATGTGGGAAGTACTCACTGGGGATGAACCCTATGCTGATATGCATTCTGCTTCACTAATAGGAGGAATTGTAAACAACAGTTTACGTCCTCGAACCCCAACATGGTGTGATCCTGAGTGGAAGTCTCTAATGGAAAGTTGTTGGGCTTCTAATCCTACAGAAAGGCCATCATTTTCAGAAATTTCCAAGAAGCTAAGGATTATGGCTGCTGCAATGAATTTGAAATAG 3141 0.4222 MCNNKGLQCLIQCDNNLFDHHSQQQHCLMDSPTAVRSSATGGSGSNDGTQRVKFLCSFLGSIMSRPQDGKLRYVGGETRILNVSRDINYEELMVKMRELYDGAAVLKYQQPDEDLDALVSVVNDDDVVNMMEEYDKLGSGDGFTRLRIFLFSQLEHDGSSHFTDGDDNERRYVDALNSLNDVSDFRKLNQMEFHVMSPLEDIHVPDQFYNPISVESGIHSQRSGELSMPPQYNLHHVATQHQQQPMSQRFSEMDSPWSPSFYSPKYHAHHDSRPLVEFPSSHSSAKYRGPFELPDYGVPEEYARHHLYDNQQQYPENVVWLPTAAPSHGEMSGFPGNILRGPNVVDGNSICDHCRMSFPRGQPPLELPNNISNGLSPVVANPCAECPSTTVNSIYPNEPSNDLVINSSMHGSTNDGHAYLSRHGSVNDRHTLSANYVQQRPGPEMGTELFPDQTMPAIPHIQIHSLEEHNMRFGNPPSPYAVDSHYTVPHGHVPGHAYAFWRNTPAPVHIGPCYEVSQQASGMINAGLIRVESNPGFLVGRDSQNAIPLVDSSQILSGHDGSAISENPYAHALKLNSNAIGQENQHPITIDATPSPQNMKASTFVEPVQLPKSSVNMVHGKVENSNAQPQSISVSEQNKSAENVFEAVGPVESNNSNSKPASQCGNVEKLADKDPSAPEDSKHFSPELIASVKKAALEGADEVRAKADEHANSEMHNATPKEETANEVELVNAHGDLELEPENDHVDTSKIEPTKAEEEAIARGLQTIKNDDLEEIRELGSGTYGAVYHGKWKGSNVAIKRIKASCFAGRPSERARMIADFWKEALMLSSLHHPNVVSFYGIVRDGPDGSLATVTEFMVNGSLKQFLHKKDRTIDRRKRLIIAMDAAFGMEYLHAKNIVHFDLKCENLLVNMRDPQRPICKIGDLGLSKVKQHTLVSGGVRGTLPWMAPELLSGKSTMVTEKIDVYSFGIVMWEVLTGDEPYADMHSASLIGGIVNNSLRPRTPTWCDPEWKSLMESCWASNPTERPSFSEISKKLRIMAAAMNLK* 1047
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0356 1046 Gene3D Phosphorylase Kinase; domain 1 759 859 - -
Lan1g0356 1046 Pfam Protein tyrosine and serine/threonine kinase 774 1036 IPR001245 GO:0004672|GO:0006468
Lan1g0356 1046 MobiDBLite consensus disorder prediction 649 664 - -
Lan1g0356 1046 Gene3D - 70 153 - -
Lan1g0356 1046 SMART serkin_6 773 1039 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan1g0356 1046 PANTHER - 32 258 - -
Lan1g0356 1046 PANTHER - 621 1046 - -
Lan1g0356 1046 PANTHER - 404 621 - -
Lan1g0356 1046 Gene3D Transferase(Phosphotransferase) domain 1 860 1045 - -
Lan1g0356 1046 ProSitePatterns Serine/Threonine protein kinases active-site signature. 898 910 IPR008271 GO:0004672|GO:0006468
Lan1g0356 1046 SMART PB1_new 66 151 IPR000270 GO:0005515
Lan1g0356 1046 CDD PB1_UP2 55 151 - -
Lan1g0356 1046 Pfam PB1 domain 67 152 IPR000270 GO:0005515
Lan1g0356 1046 CDD STKc_MAP3K-like 779 1036 - -
Lan1g0356 1046 SUPERFAMILY Protein kinase-like (PK-like) 765 1034 IPR011009 -
Lan1g0356 1046 MobiDBLite consensus disorder prediction 649 684 - -
Lan1g0356 1046 ProSitePatterns Protein kinases ATP-binding region signature. 779 800 IPR017441 GO:0005524
Lan1g0356 1046 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 621 1046 - -
Lan1g0356 1046 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 32 258 - -
Lan1g0356 1046 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 404 621 - -
Lan1g0356 1046 SUPERFAMILY CAD & PB1 domains 68 155 - -
Lan1g0356 1046 PRINTS Tyrosine kinase catalytic domain signature 855 868 IPR001245 GO:0004672|GO:0006468
Lan1g0356 1046 PRINTS Tyrosine kinase catalytic domain signature 892 910 IPR001245 GO:0004672|GO:0006468
Lan1g0356 1046 PRINTS Tyrosine kinase catalytic domain signature 963 985 IPR001245 GO:0004672|GO:0006468
Lan1g0356 1046 PRINTS Tyrosine kinase catalytic domain signature 1007 1029 IPR001245 GO:0004672|GO:0006468
Lan1g0356 1046 ProSiteProfiles Protein kinase domain profile. 773 1038 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0356 Lan-Chr1 2688470 2697868 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g0356 29 1046 MAP Kinase Kinase Kinase AT5G57610 52.500 0.0 978
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Lan1g0356 PK_Tyr_Ser-Thr 8.1e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0356 - - lang:109355391 1830.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan1g0356 1 2688470 2697868 Lan1g0356 1 2688470 2697868 ECH
Lan12g1060 12 17178284 17184663 Lan1g0356 1 2688470 2697868 LSH
Lan1g1211 1 22017740 22024016 Lan1g0356 1 2688470 2697868 LSH
Lan1g0356 1 2688470 2697868 Lan14g0032 14 511699 519332 PCT
Lan14g0032 14 511699 519332 Lan1g0356 1 2688470 2697868 PCT