Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0334 ATGCCCAAGTGCAGCAACAGTTTGATCGGAATACTGAATGTGGTGACCACCCTTCTCTCCATTCCAATTATTATCGTCGGCATTTGGCTGAGCAAGCAAAGCGGCACCGAATGCGAACGGTGGCTTGAAAAACCCGTCATCGCCGTCGGCGTGTTCCTTTTGCTTGTTTCAATCGCGGGTCTAGTCGGCGCGTGTTACCGTGTGACGTGGCTCCTATGGGTTTACCTATTGGTTATGTTCTTGCTGATCGTGATTCTGTTTGCGTTCACTGTGTTTTCCTTCGTTATAACGAACAAAGGTGCTGGTAAAGCGCTTTCTGGTAAGGGTTATAAGGAGTATAGGCTTGGTGATTATTCGAACTGGTTGCAGAAGAGAGTTAGTGGAAGCACATGGAAGAGGATCAGCAGTTGTTTGTACGCTGGTCAACTCTGCTCCACTTTCGAATCCAAATATGCTAACGATACTGTTTATGAGTTCTACCTTCGGGATTTGTCGCCCCTTCAGTCTGGATGCTGCAAGCCTTCAAATGACTGCAGTTACATGTATAAGAGTCCAACTAACTGGGCTAAGTTAGGAAATGCAACTCTTACCAACCCTGATTGTATTACTTGGAGTAATGATCCAAAGCTTCTATGCTACAATTGCCAATCCTGCAAGGCTGGTTTGCTGGAAAACCTTAAGACATCCTGGAAGAAGGTGTCTGTTGTCAATGTCGTATTCCTCGTCTTCCTCATTATTGTCTACGCCGTTGGTTGCTGCGCGTTCAGGAATAACAGGATGGACAATTATTTTGTGAAATATTAG 804 0.454 MPKCSNSLIGILNVVTTLLSIPIIIVGIWLSKQSGTECERWLEKPVIAVGVFLLLVSIAGLVGACYRVTWLLWVYLLVMFLLIVILFAFTVFSFVITNKGAGKALSGKGYKEYRLGDYSNWLQKRVSGSTWKRISSCLYAGQLCSTFESKYANDTVYEFYLRDLSPLQSGCCKPSNDCSYMYKSPTNWAKLGNATLTNPDCITWSNDPKLLCYNCQSCKAGLLENLKTSWKKVSVVNVVFLVFLIIVYAVGCCAFRNNRMDNYFVKY* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0334 267 PANTHER TETRASPANIN-8 3 264 - -
Lan1g0334 267 ProSitePatterns Transmembrane 4 family signature. 50 72 IPR018503 GO:0016021
Lan1g0334 267 PANTHER TETRASPANIN-8-RELATED 3 264 IPR044991 GO:0009734|GO:0016021
Lan1g0334 267 Pfam Tetraspanin family 7 254 IPR018499 GO:0016021
Lan1g0334 267 PRINTS Transmembrane four family signature 7 30 - -
Lan1g0334 267 PRINTS Transmembrane four family signature 39 65 - -
Lan1g0334 267 PRINTS Transmembrane four family signature 66 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0334 Lan-Chr1 2467576 2470549 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g0334 1 266 Miscellaneous Gene Families AT2G23810 62.547 7.73e-123 349
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0334 - - pper:18790827 380.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan1g0334 1 2467576 2470549 Lan1g0334 1 2467576 2470549 ECH
Lan12g1241 12 18387151 18388756 Lan1g0334 1 2467576 2470549 LSH
Lan1g1195 1 21866726 21869338 Lan1g0334 1 2467576 2470549 LSH