Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0325 ATGAAATACGTTCAAACCCGCTTGTTGTTTTCACTACCCATGGCTCTCATTCTAAATTCCGTTACTCTCATTCTCTTCTTCCTCTCACGTGTTGCTCTATCTTCTTCTTCTTCTTCTTCTTCAGAGCCTCGCAATCATGAAGTGGAGGCTTTGATGAGTATAAGAGAAGGTTTGAGTGATCCACATGGTGTGTTGAATAACTGGGATGAATATTCTGTTGATGCTTGTAGTTGGGCTATGATTACTTGTTCATCTGATTCTCTTGTTATTGGATTTGGAGCACCTAGTCAATCTCTCTCTGGAACTTTATCTCCAGCCATTGCTAATCTCACCAATCTTCAACAAGTGTTACTGCAGAATAACAATATTTCAGGAAAAATCCCACTGGAGCTTGGAACCCTTCCCAAGCTTCAGACATTGGATCTTTCTAATAATCATTTCTCTGGGGTCATTCCTGCATCTTTGAGTCAGTTGAATACTCTTCAATACCTGAGGCTCAACAACAATAGTTTGTCTGGTCCATTTCCTGTGTCACTTGGCAAAAACCCACAACTTGCTTTTTTGGACTTGTCTTATAACAATCTCAGTGGACCATTGCCCAAGTTTCCAGCCAGGTCATTCAATGTTGTGGGGAACCCATTAATTTGTGGAAGCAGCTCTGTTAAAGATTGTTCTGGAACAGTAACCTTCATGCCTGTTCCCCTTTCTCAAGCATTGTCACAAGGGAAACAAAAGTCCAAAAAACTTGCAATTGCACTTGGAATCAGCCTTAGTTGTGCTTCTCTCATGCTTCTCTTTTTTGGACTCATTTGGTATAGAAAGAAACAACAGTATCAAGCCACCCTGTATATTAGTGGTTATAAGGAAGATGGAGTTGTTAACTTGGGAAATCTAAAAAAATTCACTTTTAGAGAGCTTCAACATGCAACAGATAATTTCAGCTCCAAGAGCATTCTTGGTGCTGGAGGTTTTGGCAATGTTTATAGGGGGAAGTTTGGAGATGGCACAATGGTGGCTGTGAAAAGACTGAAAGATGTAACTGGAAGTGCTGGTGAGTCACAGTTCCAAACAGAATTGGAGATGATCAGCTTGGCAGTTCACCGTCATTTACTTCGCTTAATTGGATATTGTGCTACTCCTTGTGAAAAACTTCTGGTTTATCCTTATATGTCTAATGGCAGTGTGGCAGCCAGGCTTAGAGGGAAGCCAGCTTTAGATTGGAACACAAGAAAGAGTATTGCAATTGGAGCTGCCAGAGGTCTTTTGTATTTGCACGAGCAATGTGATCCAAAGATAATACACAGAGATGTAAAGGCTGCTAATGTGCTTTTGGATGACTATTGCGAAGCTGTAGTTGGTGATTTTGGCCTCGCAAAGCTCTTGGACCATGCTGACTCCCATGTCACCACTGCCGTCCGTGGCACTGTTGGGCACATTGCACCGGAGTACCTTTCCACTGGCCAATCATCTGAGAAAACTGATGTATTTGGATTTGGCATTCTCTTGTTAGAGCTCATAACGGGAATGACTGCTTTGGAGTTTGGAAAAACGGTGAATCAAAAAGGCGCTATGCTAGAGTGGGTTAGGAAAATACAGCATGAGAAGAAGGTTGAAGTTTTGATGGACAGAGAGCTTGGGAGCAACTATGATAGAATAGAGGTGGGAGAGATGCTGCAAGTAGCTTTACTTTGCACTCAAAATTTGCCAGCCCACCGTCCCAAAATGTCCGAAGTGGTCCGAATGCTCGAAGGTGATGGCCTTGCAGAGAAGTGGGCGGCATCACATAATCATAGTAGTCAAAGCATCACCCCCTGTCACAGCAACAGTAGTAGTAGTTCATCCCACCCTACCTCTTCTGCTTCAAAACATGATGACACTGCTCATGATCGTTCAAGCATTTTCGGCATGACAATGGATGATGACGATGATCGTTCATTGGATTCCTATGCCATGGAACTCTCTGGGCCTAGATAA 1974 0.4281 MKYVQTRLLFSLPMALILNSVTLILFFLSRVALSSSSSSSSEPRNHEVEALMSIREGLSDPHGVLNNWDEYSVDACSWAMITCSSDSLVIGFGAPSQSLSGTLSPAIANLTNLQQVLLQNNNISGKIPLELGTLPKLQTLDLSNNHFSGVIPASLSQLNTLQYLRLNNNSLSGPFPVSLGKNPQLAFLDLSYNNLSGPLPKFPARSFNVVGNPLICGSSSVKDCSGTVTFMPVPLSQALSQGKQKSKKLAIALGISLSCASLMLLFFGLIWYRKKQQYQATLYISGYKEDGVVNLGNLKKFTFRELQHATDNFSSKSILGAGGFGNVYRGKFGDGTMVAVKRLKDVTGSAGESQFQTELEMISLAVHRHLLRLIGYCATPCEKLLVYPYMSNGSVAARLRGKPALDWNTRKSIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDYCEAVVGDFGLAKLLDHADSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMTALEFGKTVNQKGAMLEWVRKIQHEKKVEVLMDRELGSNYDRIEVGEMLQVALLCTQNLPAHRPKMSEVVRMLEGDGLAEKWAASHNHSSQSITPCHSNSSSSSSHPTSSASKHDDTAHDRSSIFGMTMDDDDDRSLDSYAMELSGPR* 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0325 657 MobiDBLite consensus disorder prediction 621 648 - -
Lan1g0325 657 MobiDBLite consensus disorder prediction 592 657 - -
Lan1g0325 657 Gene3D Phosphorylase Kinase; domain 1 284 389 - -
Lan1g0325 657 Gene3D Ribonuclease Inhibitor 44 226 IPR032675 -
Lan1g0325 657 ProSitePatterns Serine/Threonine protein kinases active-site signature. 432 444 IPR008271 GO:0004672|GO:0006468
Lan1g0325 657 ProSitePatterns Protein kinases ATP-binding region signature. 319 341 IPR017441 GO:0005524
Lan1g0325 657 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 24 657 - -
Lan1g0325 657 ProSiteProfiles Protein kinase domain profile. 313 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan1g0325 657 SMART serkin_6 313 582 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan1g0325 657 Pfam Protein tyrosine and serine/threonine kinase 316 582 IPR001245 GO:0004672|GO:0006468
Lan1g0325 657 Gene3D Transferase(Phosphotransferase) domain 1 390 601 - -
Lan1g0325 657 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 24 657 - -
Lan1g0325 657 SUPERFAMILY Protein kinase-like (PK-like) 296 583 IPR011009 -
Lan1g0325 657 MobiDBLite consensus disorder prediction 593 620 - -
Lan1g0325 657 SUPERFAMILY L domain-like 44 209 - -
Lan1g0325 657 Pfam Leucine rich repeat 135 195 IPR001611 GO:0005515
Lan1g0325 657 Pfam Leucine rich repeat N-terminal domain 45 84 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0325 Lan-Chr1 2389697 2394299 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g0325 14 657 Receptor kinase-like Gene Family AT5G16000 61.621 0.0 790
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Lan1g0325 PK_Tyr_Ser-Thr 3.8e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0325 - - gmx:100775565 1030.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan1g0325 1 2389697 2394299 Lan1g0325 1 2389697 2394299 ECH
Lan12g1085 12 17383701 17388921 Lan1g0325 1 2389697 2394299 LSH