LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lan1g0320	ATGGCCCAAACGTGGTGGTGCTTTGTTCACTATCTTGTGTGGGTCATTTCCACTGCTCTTGTTCTCACAGCAACACCACCTTCATCTCATCAAATCCATGACAAGGTTGGTACCCTCCCTGGTCAAAACTTCAACATCAACTTCTCTCACTATTCTGGTTATGTCACTGTCAATGAGGAAGCTGGAAGGGCACTGTTTTATTGGTTTATTGAGGCTGATCAATACCCTCAAACCAAGCCACTTCTTTTATGGTTCAATGGAGGGCCTGGATGCTCATCAATTGCTTATGGGGAGGCAGAGGAAATTGGCCCCTTTCATATACAACCAGATGGGAAGACCCTTTATCTTAATCCTTACTCTTGGAATCAAGTTGCAAACATTCTTTTTGTGGATTCTCCTGTCGGAGTTGGATTTTCATATTCAAACACTTCATCCGACATTCTGAACAATGGTGACAAGAGGACTGCTGAGGACTCTTTAATATTTCTATTGAGGTGGTTTGAGCGTTTTCCCCAATATAAAGGAAGGGACGTCTTTATTGCTGGAGAGAGCTATGCAGGGCATTATGTTCCTCAACTTAGCCAAGCTATTGTGAAGTACAACTTTGAAAATAAGGAAAATGCTATAAATCTGAAAGGTTACTTGGTTGGAAATGCTCTTACTGATGATAGCCATGACCATTTGGGGATTGCTCAGTTTATGTGGTCAAGTGGTTTGATATCTGATCAAACATACAATCTCTTGAACCTTCTTTGTGGCAATCAGTCATTTGTACACCCCTCAGAAGCTTGTGATAAAATTCAAGAAGTTGCTGATAGAGAACTTGGCAACATTGATCCGTACAGTATCTTTACTCCTCCATGTCCTGCTAATCTTAGCCAGTCAACTCAGCTTCTGAGAAGAAAGCGTAGAATTGGTAAACTCAATGAAGCATATGATCCTTGCACCGAGGGTCACTCTACCACGTACTTCAATCTACCTGAGGTTCAAAAGGCACTTCATGTTGATCCAGCCCATAAGCCTGCTAAATGGGATACATGCAGTGATGAGGTAAATACCAACTGGAAGGATTCTCCAAGAACTGTGCTTGATATTTATCGTGAGCTTATTCCTTTGGGACTGAGGATATGGGTGTTCAGTGGTGACACAGATGCCGTAATCCCAGTGGCGTCTACTCGCTATAGTATAGATGCTCTTAGGCTCCCAACAGTGAGATCTTGGCGTCCGTGGTATCATGATGGGCAGGTTGGAGGATGGACACAAGAATATGCAGGACTTACCTTTGTGGCAGTAAGAGGAGCAGGGCATGAAGTTCCTCTGCATAGACCTAAACTTGCTCTTGCACTCATTAAAGCCTACTTAGCTGGAACCTCCTTGCCAGCCATTGAGCTTGTCAGTGTTTATTAA	1407	0.4321	MAQTWWCFVHYLVWVISTALVLTATPPSSHQIHDKVGTLPGQNFNINFSHYSGYVTVNEEAGRALFYWFIEADQYPQTKPLLLWFNGGPGCSSIAYGEAEEIGPFHIQPDGKTLYLNPYSWNQVANILFVDSPVGVGFSYSNTSSDILNNGDKRTAEDSLIFLLRWFERFPQYKGRDVFIAGESYAGHYVPQLSQAIVKYNFENKENAINLKGYLVGNALTDDSHDHLGIAQFMWSSGLISDQTYNLLNLLCGNQSFVHPSEACDKIQEVADRELGNIDPYSIFTPPCPANLSQSTQLLRRKRRIGKLNEAYDPCTEGHSTTYFNLPEVQKALHVDPAHKPAKWDTCSDEVNTNWKDSPRTVLDIYRELIPLGLRIWVFSGDTDAVIPVASTRYSIDALRLPTVRSWRPWYHDGQVGGWTQEYAGLTFVAVRGAGHEVPLHRPKLALALIKAYLAGTSLPAIELVSVY*	469

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lan1g0320	468	PANTHER	SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE	16	462	IPR001563	GO:0004185\|GO:0006508
	Lan1g0320	468	SUPERFAMILY	alpha/beta-Hydrolases	36	459	IPR029058	-
	Lan1g0320	468	Pfam	Serine carboxypeptidase	40	455	IPR001563	GO:0004185\|GO:0006508
	Lan1g0320	468	ProSitePatterns	Serine carboxypeptidases, histidine active site.	426	443	IPR033124	GO:0004185
	Lan1g0320	468	ProSitePatterns	Serine carboxypeptidases, serine active site.	180	187	IPR018202	GO:0004185
	Lan1g0320	468	PRINTS	Carboxypeptidase C serine protease (S10) family signature	117	129	IPR001563	GO:0004185\|GO:0006508
	Lan1g0320	468	PRINTS	Carboxypeptidase C serine protease (S10) family signature	130	140	IPR001563	GO:0004185\|GO:0006508
	Lan1g0320	468	PRINTS	Carboxypeptidase C serine protease (S10) family signature	166	191	IPR001563	GO:0004185\|GO:0006508
	Lan1g0320	468	PRINTS	Carboxypeptidase C serine protease (S10) family signature	426	439	IPR001563	GO:0004185\|GO:0006508
	Lan1g0320	468	Gene3D	-	362	456	-	-
	Lan1g0320	468	Gene3D	-	315	353	-	-
	Lan1g0320	468	PANTHER	SERINE CARBOXYPEPTIDASE-LIKE 29	16	462	-	-
	Lan1g0320	468	Gene3D	alpha/beta hydrolase	31	290	IPR029058	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lan1g0320	Lan-Chr1	2331062	2335424	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lan1g0320	318	459	Calmodulin-binding Proteins	AT2G22960	25.874	1.62e-11	61.2

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lan1g0320	K16297		-	zju:107426294	730.324